| Protein: | gi|108862829 |
| Organism: | Oryza sativa Japonica Group |
| Length: | 758 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|108862829.
| Description | E-value | Query Range |
Subject Range |
|
|
415.0 | [0..5] | [758..6] |
|
Region A: Residues: [1-71] |
1 11 21 31 41 51
| | | | | |
1 MEASGEELLK KIRELEVGQA QLKQEMSKLG GAAAAAERRR SQSVSPRRGA APPPPHQPPL 60
61 PARRLSGGFE G
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [72-215] |
1 11 21 31 41 51
| | | | | |
1 GARAWARGSA SFPHSSPLQR EGRAAAAAGG GLTEKQYTRV LQSLGQSVHI LDLEGKIMYW 60
61 NRSAEKLYGY PASEALGQDG LMLLIDSCDI NVVNDIFRRI SLGESWTGKF PVKNRAGDRF 120
121 SAVATNTPFY DEDGSLVGIV CVSS
|
| Detection Method: | |
| Confidence: | 13.30103 |
| Match: | 2gj3A |
| Description: | No description for 2gj3A was found. |
|
Region A: Residues: [216-303] |
1 11 21 31 41 51
| | | | | |
1 DLRTMEEIIS GPSICARPHP ESSRTYCEAS CSNSNRKASL LSRSPFDSQQ PLQSTIASKI 60
61 TNLATKVTNK VRSRVRADEN GIEREGGS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [304-473] |
1 11 21 31 41 51
| | | | | |
1 GESHCSDRDA KEEPTSSGTT TPRGDAPRGA FATEESSPGK TAKMNSDESE GKVGFHRILS 60
61 SKAEALLNKK GISWPWKGRD NDGPDVKNQA TWPWLHGEQD GSQNHQKISD SAITQDGQGA 120
121 EYNQPNKNEA SGSWSSFNNN STSSASSTGS TNSSALYKVD HEADCLDYEI
|
| Detection Method: | |
| Confidence: | 11.0 |
| Match: | 1g83A |
| Description: | Fyn proto-oncogene tyrosine kinase, SH3 domain; Tyrosine kinase Fyn |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 3.06905798270146 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.21254869336424 | bayes_pls_golite062009 |
| protein binding | 2.08632303609243 | bayes_pls_golite062009 |
| actin binding | 1.79651396322487 | bayes_pls_golite062009 |
| vinculin binding | 1.63216315345235 | bayes_pls_golite062009 |
| signal transducer activity | 1.34867629228264 | bayes_pls_golite062009 |
| molecular transducer activity | 1.34867629228264 | bayes_pls_golite062009 |
| transporter activity | 0.896907103596953 | bayes_pls_golite062009 |
| actin filament binding | 0.81415274660559 | bayes_pls_golite062009 |
| epidermal growth factor receptor binding | 0.80673395326897 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.713068405985864 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.500685400112742 | bayes_pls_golite062009 |
| receptor binding | 0.351326788023913 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.272368655500689 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.00318812576030902 | bayes_pls_golite062009 |
|
Region A: Residues: [474-758] |
1 11 21 31 41 51
| | | | | |
1 LWEDLVIGEQ IGQGSCGTVY HALWYGSDVA VKVFSKQEYS EEVIQTFRQE VSLMKKLRHP 60
61 NILLFMGAVT SPQRLCIVTE FLPRGSLFRL LQRNNTKLDW RRRVHMALDI ARGMNYLHHF 120
121 SPLIIHRDLK SSNLLVDKNW TVKVADFGLS RLKRETFLTT KTGKGTPQWM APEVLRNEPS 180
181 DEKSDVYSYG VILWELVTQK IPWENLNSMQ VIGAVGFMNH RLEIPSETDP QWTSLILSCW 240
241 ETDSQLRPSF QQLLERLREL QRQYNVQTQM QRNASAAAKN SSIEE
|
| Detection Method: | |
| Confidence: | 63.39794 |
| Match: | 1uwjA |
| Description: | The complex of mutant V599E B-RAF and BAY439006 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein kinase activity | 5.4586557943719 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 5.04467222534257 | bayes_pls_golite062009 |
| kinase activity | 4.85903980916957 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 4.63692708178478 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 4.46381887831481 | bayes_pls_golite062009 |
| transmembrane receptor protein tyrosine kinase activity | 3.41480681854114 | bayes_pls_golite062009 |
| transmembrane receptor protein kinase activity | 3.40140621607334 | bayes_pls_golite062009 |
| transferase activity | 3.26787750561728 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 2.8153155526437 | bayes_pls_golite062009 |
| binding | 2.74863538127007 | bayes_pls_golite062009 |
| transmembrane receptor activity | 2.59526003830791 | bayes_pls_golite062009 |
| molecular transducer activity | 2.40586892801446 | bayes_pls_golite062009 |
| signal transducer activity | 2.40586892801446 | bayes_pls_golite062009 |
| receptor activity | 2.39311927684508 | bayes_pls_golite062009 |
| receptor signaling protein activity | 2.10379226653669 | bayes_pls_golite062009 |
| ATP binding | 1.97600611746091 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 1.93596671856664 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 1.90928021591891 | bayes_pls_golite062009 |
| receptor signaling protein serine/threonine kinase activity | 1.81249386965144 | bayes_pls_golite062009 |
| non-membrane spanning protein tyrosine kinase activity | 1.66669268613198 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 1.65732943334212 | bayes_pls_golite062009 |
| ribonucleotide binding | 1.65726906484847 | bayes_pls_golite062009 |
| purine nucleotide binding | 1.63763394711025 | bayes_pls_golite062009 |
| nucleotide binding | 1.63195828048121 | bayes_pls_golite062009 |
| growth factor binding | 1.53863828216563 | bayes_pls_golite062009 |
| protein binding | 1.22565748038754 | bayes_pls_golite062009 |
| catalytic activity | 1.21655087018101 | bayes_pls_golite062009 |
| transmembrane receptor protein serine/threonine kinase activity | 1.10045286406485 | bayes_pls_golite062009 |
| transforming growth factor beta receptor activity | 1.10045286406485 | bayes_pls_golite062009 |
| MAP kinase activity | 0.81943579965027 | bayes_pls_golite062009 |
| fibroblast growth factor receptor activity | 0.75189004129952 | bayes_pls_golite062009 |
| insulin receptor substrate binding | 0.74324450025139 | bayes_pls_golite062009 |
| transporter activity | 0.710766490066447 | bayes_pls_golite062009 |
| insulin receptor activity | 0.692904214601 | bayes_pls_golite062009 |
| MAP kinase kinase activity | 0.610230065465794 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.60324822483033 | bayes_pls_golite062009 |
| activin binding | 0.510364757301021 | bayes_pls_golite062009 |
| cyclin-dependent protein kinase activity | 0.499492353295369 | bayes_pls_golite062009 |
| magnesium ion binding | 0.393328812780268 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.385603245903806 | bayes_pls_golite062009 |
| PTB domain binding | 0.372700602565411 | bayes_pls_golite062009 |
| JUN kinase kinase kinase kinase activity | 0.349343975617553 | bayes_pls_golite062009 |
| phosphoinositide 3-kinase binding | 0.33808087202461 | bayes_pls_golite062009 |
| insulin binding | 0.326213234151689 | bayes_pls_golite062009 |
| kinase binding | 0.26752427107238 | bayes_pls_golite062009 |
| protein complex binding | 0.239339759110451 | bayes_pls_golite062009 |
| receptor binding | 0.197402253061255 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.152203945257581 | bayes_pls_golite062009 |
| transforming growth factor beta receptor activity, type I | 0.0506751594607393 | bayes_pls_golite062009 |
| protein kinase binding | 0.00674998152095019 | bayes_pls_golite062009 |
