| Protein: | ELL |
| Organism: | Homo sapiens |
| Length: | 621 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ELL.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..621] | [1..616] |
|
|
0.0 | [1..621] | [1..613] |
|
|
0.0 | [1..621] | [31..634] |
|
|
0.0 | [2..621] | [7..640] |
|
|
0.0 | [1..616] | [1..609] |
|
|
0.0 | [3..620] | [8..639] |
|
|
0.0 | [3..620] | [8..639] |
|
Region A: Residues: [1-131] |
1 11 21 31 41 51
| | | | | |
1 MAALKEDRSY GLSCGRVSDG SKVSVFHVKL TDSALRAFES YRARQDSVSL RPSIRFQGSQ 60
61 GHISIPQPDC PAEARTFSFY LSNIGRDNPQ GSFDCIQQYV SSHGEVHLDC LGSIQDKITV 120
121 CATDDSYQKA R
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [132-290] |
1 11 21 31 41 51
| | | | | |
1 QSMAQAEEET RSRSAIVIKA GGRYLGKKVQ FRKPAPGATD AVPSRKRATP INLASAIRKS 60
61 GASAVSGGSG VSQRPFRDRV LHLLALRPYR KAELLLRLQK DGLTQADKDA LDGLLQQVAN 120
121 MSAKDGTCTL QDCMYKDVQK DWPGYSEGDQ QLLKRVLVR
|
| Detection Method: | |
| Confidence: | 3.55 |
| Match: | 2doaA |
| Description: | No description for 2doaA was found. |
| Term | Confidence | Notes |
| transcription regulator activity | 5.23858959608048 | bayes_pls_golite062009 |
| DNA binding | 4.54024488199476 | bayes_pls_golite062009 |
| nucleic acid binding | 4.30331577005505 | bayes_pls_golite062009 |
| binding | 3.89976494610525 | bayes_pls_golite062009 |
| transcription factor activity | 3.82269332595313 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.41045867230388 | bayes_pls_golite062009 |
| transcription activator activity | 2.13702350917359 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.12567455635303 | bayes_pls_golite062009 |
| transcription repressor activity | 1.9708626903609 | bayes_pls_golite062009 |
| transcription elongation regulator activity | 1.75305601393584 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.976708325140011 | bayes_pls_golite062009 |
| transcription factor binding | 0.752335897765285 | bayes_pls_golite062009 |
| protein binding | 0.749376520208656 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.490809930581315 | bayes_pls_golite062009 |
|
Region A: Residues: [291-399] |
1 11 21 31 41 51
| | | | | |
1 KLCQPQSTGS LLGDPAASSP PGERGRSASP PQKRLQPPDF IDPLANKKPR ISHFTQRAQP 60
61 AVNGKLGVPN GREALLPTPG PPASTDTLSS STHLPPRLEP PRAHDPLAD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [400-491] |
1 11 21 31 41 51
| | | | | |
1 VSNDLGHSGR DCEHGEAAAP APTVRLGLPL LTDCAQPSRP HGSPSRSKPK KKSKKHKDKE 60
61 RAAEDKPRAQ LPDCAPATHA TPGAPADTPG LN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [492-621] |
1 11 21 31 41 51
| | | | | |
1 GTCSVSSVPT STSETPDYLL KYAAISSSEQ RQSYKNDFNA EYSEYRDLHA RIERITRRFT 60
61 QLDAQLRQLS QGSEEYETTR GQILQEYRKI KKTNTNYSQE KHRCEYLHSK LAHIKRLIAE 120
121 YDQRQLQAWP
|
| Detection Method: | |
| Confidence: | 31.221849 |
| Match: | 1xawA |
| Description: | crystal structure of the cytoplasmic distal C-terminal domain of occludin |
Matching Structure (courtesy of the PDB): |
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