| Protein: | PSMC3 |
| Organism: | Homo sapiens |
| Length: | 439 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSMC3.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-88 | [1..439] | [117..555] |
|
|
4.0E-88 | [1..439] | [64..502] |
|
|
2.0E-87 | [2..438] | [296..717] |
|
|
3.0E-87 | [1..439] | [53..491] |
|
|
4.0E-87 | [2..438] | [286..721] |
|
|
1.0E-86 | [3..438] | [288..709] |
|
|
5.0E-86 | [2..438] | [296..717] |
|
|
8.0E-86 | [1..403] | [64..466] |
|
Region A: Residues: [1-439] |
1 11 21 31 41 51
| | | | | |
1 MNLLPNIESP VTRQEKMATV WDEAEQDGIG EEVLKMSTEE IIQRTRLLDS EIKIMKSEVL 60
61 RVTHELQAMK DKIKENSEKI KVNKTLPYLV SNVIELLDVD PNDQEEDGAN IDLDSQRKGK 120
121 CAVIKTSTRQ TYFLPVIGLV DAEKLKPGDL VGVNKDSYLI LETLPTEYDS RVKAMEVDER 180
181 PTEQYSDIGG LDKQIQELVE AIVLPMNHKE KFENLGIQPP KGVLMYGPPG TGKTLLARAC 240
241 AAQTKATFLK LAGPQLVQMF IGDGAKLVRD AFALAKEKAP SIIFIDELDA IGTKRFDSEK 300
301 AGDREVQRTM LELLNQLDGF QPNTQVKVIA ATNRVDILDP ALLRSGRLDR KIEFPMPNEE 360
361 ARARIMQIHS RKMNVSPDVN YEELARCTDD FNGAQCKAVC VEAGMIALRR GATELTHEDY 420
421 MEGILEVQAK KKANLQYYA
|
| Detection Method: |  |
| Confidence: | 80.522879 |
| Match: | 1oz4A |
| Description: | VCP/p97 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity | 4.71605970197038 | bayes_pls_golite062009 |
| peptidase activity | 3.6994352506738 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 3.52737232558306 | bayes_pls_golite062009 |
| endopeptidase activity | 3.48761031707503 | bayes_pls_golite062009 |
| binding | 2.44689197844883 | bayes_pls_golite062009 |
| motor activity | 2.32425703346903 | bayes_pls_golite062009 |
| microtubule motor activity | 2.26003723459523 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 1.85030653553169 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 1.84811666933472 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| nucleic acid binding | 0.901460716954519 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.569910969126728 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.568840867400671 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.568779924702229 | bayes_pls_golite062009 |
| nucleotide binding | 0.564275755355315 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.540750418412449 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.517457589081898 | bayes_pls_golite062009 |
| DNA binding | 0.341209040153805 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.205488803771958 | bayes_pls_golite062009 |
| ATP binding | 0.1860481660648 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.152859582615242 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.138615225841109 | bayes_pls_golite062009 |
| protein binding | 0.071010918255742 | bayes_pls_golite062009 |
| transcription regulator activity | 0.050107780790998 | bayes_pls_golite062009 |
