| Protein: | IPL1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 367 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IPL1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [2..364] | [47..415] |
|
|
0.0 | [2..364] | [330..698] |
|
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0.0 | [2..364] | [68..436] |
|
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0.0 | [2..364] | [47..415] |
|
|
0.0 | [2..364] | [47..415] |
|
|
0.0 | [2..364] | [47..416] |
|
|
0.0 | [2..365] | [54..415] |
|
Region A: Residues: [1-75] |
1 11 21 31 41 51
| | | | | |
1 MQRNSLVNIK LNANSPSKKT TTRPNTSRIN KPWRISHSPQ QRNPNSKIPS PVREKLNRLP 60
61 VNNKKFLDME SSKIP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.567 | 0.880 | chromosome segregation | a.4.5 | "Winged helix" DNA-binding domain |
| Term | Confidence | Notes |
| protein kinase activity | 5.4586557943719 | bayes_pls_golite062009 |
| kinase activity | 5.24008660655062 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 4.93501454706421 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 4.63692708178478 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 4.46381887831481 | bayes_pls_golite062009 |
| telethonin binding | 3.3248469696008 | bayes_pls_golite062009 |
| transferase activity | 3.26787750561728 | bayes_pls_golite062009 |
| binding | 2.74863538127007 | bayes_pls_golite062009 |
| alpha-actinin binding | 2.44115606050549 | bayes_pls_golite062009 |
| tubulin binding | 2.18641675163967 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.12615078788254 | bayes_pls_golite062009 |
| actinin binding | 2.0444694493411 | bayes_pls_golite062009 |
| ATP binding | 1.97600611746091 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 1.93596671856664 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 1.90928021591891 | bayes_pls_golite062009 |
| microtubule binding | 1.88110801192607 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 1.65732943334212 | bayes_pls_golite062009 |
| ribonucleotide binding | 1.65726906484847 | bayes_pls_golite062009 |
| purine nucleotide binding | 1.63763394711025 | bayes_pls_golite062009 |
| nucleotide binding | 1.63195828048121 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 1.3898059094397 | bayes_pls_golite062009 |
| actin binding | 1.33479685165255 | bayes_pls_golite062009 |
| protein binding | 1.22565748038754 | bayes_pls_golite062009 |
| catalytic activity | 1.21655087018101 | bayes_pls_golite062009 |
| receptor signaling protein serine/threonine kinase activity | 1.20800936400261 | bayes_pls_golite062009 |
| receptor signaling protein activity | 1.13658159660305 | bayes_pls_golite062009 |
| cyclin-dependent protein kinase activity | 0.959360414036299 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.612883428421652 | bayes_pls_golite062009 |
| transporter activity | 0.553953601841147 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.51726292539973 | bayes_pls_golite062009 |
| nucleic acid binding | 0.444972929276369 | bayes_pls_golite062009 |
| magnesium ion binding | 0.393328812780268 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.37676337669549 | bayes_pls_golite062009 |
| signal transducer activity | 0.270054246024761 | bayes_pls_golite062009 |
| molecular transducer activity | 0.270054246024761 | bayes_pls_golite062009 |
| MAP kinase activity | 0.26024936404169 | bayes_pls_golite062009 |
| gamma-tubulin binding | 0.242410242748222 | bayes_pls_golite062009 |
| actin filament binding | 0.2403700250846 | bayes_pls_golite062009 |
| transcription regulator activity | 0.222474717779546 | bayes_pls_golite062009 |
| DNA binding | 0.198054762876122 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.0611721261859464 | bayes_pls_golite062009 |
| transmembrane receptor protein kinase activity | 0.0556163711947139 | bayes_pls_golite062009 |
| transcription factor activity | 0.026050048647416 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.00652065412910241 | bayes_pls_golite062009 |
|
Region A: Residues: [76-153] |
1 11 21 31 41 51
| | | | | |
1 SPIRKATSSK MIHENKKLPK FKSLSLDDFE LGKKLGKGKF GKVYCVRHRS TGYICALKVM 60
61 EKEEIIKYNL QKQFRREV
|
|
Region B: Residues: [167-183] |
1 11 21 31 41 51
| | | | | |
1 SYGYFHDEKR VYLLMEY
|
| Detection Method: | |
| Confidence: | 582.0103 |
| Match: | 1fotA_ |
| Description: | cAMP-dependent PK, catalytic subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [154-166] |
1 11 21 31 41 51
| | | | | |
1 EIQTSLNHPN LTK
|
|
Region B: Residues: [184-367] |
1 11 21 31 41 51
| | | | | |
1 LVNGEMYKLL RLHGPFNDIL ASDYIYQIAN ALDYMHKKNI IHRDIKPENI LIGFNNVIKL 60
61 TDFGWSIINP PENRRKTVCG TIDYLSPEMV ESREYDHTID AWALGVLAFE LLTGAPPFEE 120
121 EMKDTTYKRI AALDIKMPSN ISQDAQDLIL KLLKYDPKDR MRLGDVKMHP WILRNKPFWE 180
181 NKRL
|
| Detection Method: | |
| Confidence: | 582.0103 |
| Match: | 1fotA_ |
| Description: | cAMP-dependent PK, catalytic subunit |
| Matching Structure (courtesy of the PDB): |
|
