Protein: | ATP4 |
Organism: | Saccharomyces cerevisiae |
Length: | 244 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATP4.
Description | E-value | Query Range |
Subject Range |
|
4.0E-78 | [14..242] | [12..249] |
|
9.0E-78 | [14..242] | [12..249] |
|
3.0E-77 | [1..244] | [1..244] |
|
6.0E-77 | [14..242] | [12..249] |
|
8.0E-75 | [41..242] | [1..207] |
|
1.0E-72 | [10..244] | [5..241] |
|
2.0E-69 | [9..242] | [10..244] |
|
2.0E-68 | [14..241] | [8..244] |
Region A: Residues: [1-89] |
1 11 21 31 41 51 | | | | | | 1 MSMSMGVRGL ALRSVSKTLF SQGVRCPSMV IGARYMSSTP EKQTDPKAKA NSIINAIPGN 60 61 NILTKTGVLG TSAAAVIYAI SNELYVIND |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.656 | 0.142 | hydrogen ion transporting ATP synthase activity, rotational mechanism | a.3.1 | Cytochrome c |
View | Download | 0.772 | 0.025 | hydrogen ion transporting ATP synthase activity, rotational mechanism | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
View | Download | 0.485 | 0.019 | hydrogen ion transporting ATP synthase activity, rotational mechanism | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
View | Download | 0.900 | 0.012 | hydrogen ion transporting ATP synthase activity, rotational mechanism | a.7.7 | BAG domain |
View | Download | 0.869 | 0.003 | hydrogen ion transporting ATP synthase activity, rotational mechanism | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
View | Download | 0.423 | N/A | N/A | a.138.1 | Multiheme cytochromes |
View | Download | 0.411 | N/A | N/A | a.61.1 | Retroviral matrix proteins |
View | Download | 0.383 | N/A | N/A | a.60.1 | SAM/Pointed domain |
View | Download | 0.368 | N/A | N/A | a.39.1 | EF-hand |
View | Download | 0.366 | N/A | N/A | a.39.1 | EF-hand |
View | Download | 0.355 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
View | Download | 0.351 | N/A | N/A | a.118.11 | Cytochrome c oxidase subunit E |
View | Download | 0.330 | N/A | N/A | a.61.1 | Retroviral matrix proteins |
View | Download | 0.328 | N/A | N/A | a.11.1 | Acyl-CoA binding protein |
View | Download | 0.300 | N/A | N/A | a.29.2 | Bromodomain |
View | Download | 0.296 | N/A | N/A | a.20.1 | PGBD-like |
View | Download | 0.287 | N/A | N/A | a.60.5 | Barrier-to-autointegration factor, BAF |
View | Download | 0.273 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
View | Download | 0.264 | N/A | N/A | a.4.1 | Homeodomain-like |
View | Download | 0.262 | N/A | N/A | d.56.1 | GroEL-intermediate domain like |
View | Download | 0.259 | N/A | N/A | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
View | Download | 0.252 | N/A | N/A | d.79.2 | Tubulin/Dihydroxyacetone kinase C-terminal domain |
View | Download | 0.238 | N/A | N/A | a.74.1 | Cyclin-like |
View | Download | 0.238 | N/A | N/A | a.21.1 | HMG-box |
View | Download | 0.237 | N/A | N/A | c.12.1 | Ribosomal proteins L15p and L18e |
View | Download | 0.237 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
View | Download | 0.237 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
View | Download | 0.235 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.232 | N/A | N/A | a.29.2 | Bromodomain |
View | Download | 0.231 | N/A | N/A | a.4.1 | Homeodomain-like |
View | Download | 0.228 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
View | Download | 0.228 | N/A | N/A | a.7.1 | Spectrin repeat |
View | Download | 0.222 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.220 | N/A | N/A | a.64.1 | Saposin |
View | Download | 0.219 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
View | Download | 0.217 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
View | Download | 0.215 | N/A | N/A | a.23.5 | Hemolysin expression modulating protein HHA |
View | Download | 0.214 | N/A | N/A | d.228.1 | Replication modulator SeqA, C-terminal DNA-binding domain |
View | Download | 0.210 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
View | Download | 0.203 | N/A | N/A | a.61.1 | Retroviral matrix proteins |
View | Download | 0.202 | N/A | N/A | a.59.1 | PAH2 domain |
Region A: Residues: [90-244] |
1 11 21 31 41 51 | | | | | | 1 ESILLLTFLG FTGLVAKYLA PAYKDFADAR MKKVSDVLNA SRNKHVEAVK DRIDSVSQLQ 60 61 NVAETTKVLF DVSKETVELE SEAFELKQKV ELAHEAKAVL DSWVRYEASL RQLEQRQLAK 120 121 SVISRVQSEL GNPKFQEKVL QQSISEIEQL LSKLK |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.