| Protein: | TUF1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 437 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TUF1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..437] | [1..437] |
|
|
0.0 | [38..437] | [2..396] |
|
|
0.0 | [38..437] | [2..396] |
|
|
0.0 | [38..437] | [1..405] |
|
|
0.0 | [38..437] | [2..396] |
|
|
0.0 | [38..437] | [1..405] |
|
Region A: Residues: [1-44] |
1 11 21 31 41 51
| | | | | |
1 MSALLPRLLT RTAFKASGKL LRLSSVISRT FSQTTTSYAA AFDR
|
|
Region B: Residues: [243-437] |
1 11 21 31 41 51
| | | | | |
1 RDLNKPFLMP VEDIFSISGR GTVVTGRVER GNLKKGEELE IVGHNSTPLK TTVTGIEMFR 60
61 KELDSAMAGD NAGVLLRGIR RDQLKRGMVL AKPGTVKAHT KILASLYILS KEEGGRHSGF 120
121 GENYRPQMFI RTADVTVVMR FPKEVEDHSM QVMPGDNVEM ECDLIHPTPL EVGQRFNIRE 180
181 GGRTVGTGLI TRIIE
|
| Detection Method: |  |
| Confidence: | 1652.0 |
| Match: | 1b23P_ |
| Description: | Elongation factor Tu (EF-Tu), domain 2; Elongation factor Tu (EF-Tu); Elongation factor Tu (EF-Tu), N-terminal (G) domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| translation elongation factor activity | 8.90683166637832 | bayes_pls_golite062009 |
| structural constituent of ribosome | 7.90308112669861 | bayes_pls_golite062009 |
| structural molecule activity | 7.31087460425911 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 6.75036567581468 | bayes_pls_golite062009 |
| translation regulator activity | 6.7106575654195 | bayes_pls_golite062009 |
| transporter activity | 3.10463051760206 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.95886887664984 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.95079405147356 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.87427509025394 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.85499564954033 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.85178667290149 | bayes_pls_golite062009 |
| translation initiation factor activity | 2.68619850021832 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 2.50494515048649 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 2.39629638016861 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 2.39600931083427 | bayes_pls_golite062009 |
| ATPase activity | 2.39535714892224 | bayes_pls_golite062009 |
| nucleic acid binding | 2.39500449599674 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 2.36051733655256 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 2.35906629925754 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 2.35679406876731 | bayes_pls_golite062009 |
| ATPase activity, coupled | 2.24901251684901 | bayes_pls_golite062009 |
| binding | 2.01866595777668 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.65609907941094 | bayes_pls_golite062009 |
| hydrolase activity | 1.57549510726226 | bayes_pls_golite062009 |
| motor activity | 1.34881124154297 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.3182108176243 | bayes_pls_golite062009 |
| translation release factor activity | 1.27090696996316 | bayes_pls_golite062009 |
| translation termination factor activity | 1.2623252798648 | bayes_pls_golite062009 |
| DNA binding | 0.967303417236485 | bayes_pls_golite062009 |
| RNA binding | 0.798696391797967 | bayes_pls_golite062009 |
| transcription regulator activity | 0.748437190903548 | bayes_pls_golite062009 |
| peptidyltransferase activity | 0.705667095586631 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.704934361725919 | bayes_pls_golite062009 |
| microtubule motor activity | 0.60036517876321 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.500462538667228 | bayes_pls_golite062009 |
| GTPase activity | 0.437665353870877 | bayes_pls_golite062009 |
| ATP binding | 0.41092997612902 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.385813421701492 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.377870145186619 | bayes_pls_golite062009 |
| anion transmembrane-transporting ATPase activity | 0.353150780751661 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.282397764628576 | bayes_pls_golite062009 |
| protein binding | 0.242047208982959 | bayes_pls_golite062009 |
| RNA helicase activity | 0.2302541318658 | bayes_pls_golite062009 |
| inorganic anion transmembrane transporter activity | 0.12168417344278 | bayes_pls_golite062009 |
| microfilament motor activity | 0.10236059675512 | bayes_pls_golite062009 |
| protein transporter activity | 0.0397092337273124 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 0.0378638259240902 | bayes_pls_golite062009 |
| peptide transporter activity | 0.0135927378126404 | bayes_pls_golite062009 |
| actin binding | 0.00482938540552702 | bayes_pls_golite062009 |
| signal sequence binding | 6.53725193420218E-4 | bayes_pls_golite062009 |
|
Region A: Residues: [45-242] |
1 11 21 31 41 51
| | | | | |
1 SKPHVNIGTI GHVDHGKTTL TAAITKTLAA KGGANFLDYA AIDKAPEERA RGITISTAHV 60
61 EYETAKRHYS HVDCPGHADY IKNMITGAAQ MDGAIIVVAA TDGQMPQTRE HLLLARQVGV 120
121 QHIVVFVNKV DTIDDPEMLE LVEMEMRELL NEYGFDGDNA PIIMGSALCA LEGRQPEIGE 180
181 QAIMKLLDAV DEYIPTPE
|
| Detection Method: | |
| Confidence: | 1652.0 |
| Match: | 1b23P_ |
| Description: | Elongation factor Tu (EF-Tu), domain 2; Elongation factor Tu (EF-Tu); Elongation factor Tu (EF-Tu), N-terminal (G) domain |
| Matching Structure (courtesy of the PDB): |
|
