| Protein: | BUB3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 341 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BUB3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [3..341] | [917..1230] |
|
|
9.0E-97 | [2..341] | [1149..1463] |
|
Region A: Residues: [1-341] |
1 11 21 31 41 51
| | | | | |
1 MQIVQIEQAP KDYISDIKII PSKSLLLITS WDGSLTVYKF DIQAKNVDLL QSLRYKHPLL 60
61 CCNFIDNTDL QIYVGTVQGE ILKVDLIGSP SFQALTNNEA NLGICRICKY GDDKLIAASW 120
121 DGLIEVIDPR NYGDGVIAVK NLNSNNTKVK NKIFTMDTNS SRLIVGMNNS QVQWFRLPLC 180
181 EDDNGTIEES GLKYQIRDVA LLPKEQEGYA CSSIDGRVAV EFFDDQGDDY NSSKRFAFRC 240
241 HRLNLKDTNL AYPVNSIEFS PRHKFLYTAG SDGIISCWNL QTRKKIKNFA KFNEDSVVKI 300
301 ACSDNILCLA TSDDTFKTNA AIDQTIELNA SSIYIIFDYE N
|
| Detection Method: |  |
| Confidence: | 72.154902 |
| Match: | 1b9xA_ |
| Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| dynein binding | 3.17817581100892 | bayes_pls_golite062009 |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.10036013463576 | bayes_pls_golite062009 |
| transcription repressor activity | 1.6725482369574 | bayes_pls_golite062009 |
| nucleic acid binding | 1.63776917287392 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 1.59258100795958 | bayes_pls_golite062009 |
| transcription regulator activity | 1.56901113625383 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 1.48624129577934 | bayes_pls_golite062009 |
| actin binding | 1.40831746593132 | bayes_pls_golite062009 |
| protein binding | 1.21879977456466 | bayes_pls_golite062009 |
| DNA binding | 1.0776875611211 | bayes_pls_golite062009 |
| tubulin binding | 1.07196649995443 | bayes_pls_golite062009 |
| microtubule binding | 1.04245147316521 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.963909191437161 | bayes_pls_golite062009 |
| transcription factor activity | 0.541665384827041 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.535041400676017 | bayes_pls_golite062009 |
| transporter activity | 0.284701931503833 | bayes_pls_golite062009 |
| structural molecule activity | 0.254012051644049 | bayes_pls_golite062009 |
| transcription factor binding | 0.244641056034795 | bayes_pls_golite062009 |
| hydrolase activity | 0.181211933860468 | bayes_pls_golite062009 |
| histone binding | 0.166694897714113 | bayes_pls_golite062009 |
| 0.0248988265652406 | bayes_pls_golite062009 | |
| transcription cofactor activity | 0.0160791658499004 | bayes_pls_golite062009 |
