| Protein: | NGL1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 363 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NGL1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..363] | [1..363] |
|
|
2.0E-96 | [4..359] | [167..530] |
|
|
1.0E-89 | [4..363] | [190..559] |
|
|
8.0E-89 | [26..361] | [335..672] |
|
|
2.0E-87 | [4..362] | [230..580] |
|
|
7.0E-87 | [26..362] | [394..727] |
|
|
3.0E-78 | [4..363] | [222..593] |
|
Region A: Residues: [1-363] |
1 11 21 31 41 51
| | | | | |
1 MFTRRFIPVV QSTKQNIGKY VRKDARFTLL TYNMLSPSYM WPQVYTYVAE PYKNWSYRHR 60
61 LLEKELLNTF KADIMCLQEM TARDYEDYWH DSIGVDVNYG SKFISKTPPK YWKKPVKDMD 120
121 GVSIFYNLAK FDFISSSGIY LNQLLNVFNQ RELKYLYNKK VTLTDGASNV IGEDSLLDVL 180
181 KGKNQVCLFV SLRHKETGTI FVVLNTHLYW KYDEVKLTQC MIIMRELSKI IKQLLPGDVK 240
241 GQERVKILFT GDLNSTRDSL VVNFLQGQIV SHGDLNLINP MRPYLDRCVY DDIPKDYFVH 300
301 TCYSGKLKGI FDYVWYHDSD FLLTKILTGN EVSDELLASN QLGLPNENHP SDHIPLLTEF 360
361 KIL
|
| Detection Method: |  |
| Confidence: | 13.06 |
| Match: | 1hd7A |
| Description: | DNA repair endonuclease Hap1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity | 3.03637986118891 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 2.64138912616286 | bayes_pls_golite062009 |
| transcription regulator activity | 2.38142407142222 | bayes_pls_golite062009 |
| nucleic acid binding | 2.36300991054709 | bayes_pls_golite062009 |
| DNA binding | 2.34848945028683 | bayes_pls_golite062009 |
| binding | 1.77207262408714 | bayes_pls_golite062009 |
| catalytic activity | 1.63030570728465 | bayes_pls_golite062009 |
| nuclease activity | 1.43406183661088 | bayes_pls_golite062009 |
| transcription coactivator activity | 1.3192080792879 | bayes_pls_golite062009 |
| deoxyribonuclease activity | 1.2263976316786 | bayes_pls_golite062009 |
| exonuclease activity | 1.0469071871605 | bayes_pls_golite062009 |
| oxidoreductase activity | 1.01237142327007 | bayes_pls_golite062009 |
| ribonuclease activity | 0.921398762372674 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 0.816802516530232 | bayes_pls_golite062009 |
| transcription activator activity | 0.794530147502372 | bayes_pls_golite062009 |
| transcription factor binding | 0.676190329566283 | bayes_pls_golite062009 |
| protein binding | 0.477100720412367 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.456888438009074 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity, producing 5'-phosphomonoesters | 0.268550639537333 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity | 0.260804033000249 | bayes_pls_golite062009 |
| endonuclease activity | 0.122198690326292 | bayes_pls_golite062009 |
