Protein: | KRE33 |
Organism: | Saccharomyces cerevisiae |
Length: | 1056 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KRE33.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..1056] | [1..1010] |
|
0.0 | [3..1006] | [2..971] |
|
0.0 | [1..1053] | [1..1030] |
|
0.0 | [3..1041] | [2..1025] |
|
0.0 | [1..1056] | [1..1056] |
Region A: Residues: [1-101] |
1 11 21 31 41 51 | | | | | | 1 MAKKAIDSRI PSLIRNGVQT KQRSIFVIVG DRARNQLPNL HYLMMSADLK MNKSVLWAYK 60 61 KKLLGFTSHR KKRENKIKKE IKRGTREVNE MDPFESFISN Q |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [102-720] |
1 11 21 31 41 51 | | | | | | 1 NIRYVYYKES EKILGNTYGM CILQDFEALT PNLLARTIET VEGGGIVVIL LKSMSSLKQL 60 61 YTMTMDVHAR YRTEAHGDVV ARFNERFILS LGSNPNCLVV DDELNVLPLS GAKNVKPLPP 120 121 KEDDELPPKQ LELQELKESL EDVQPAGSLV SLSKTVNQAH AILSFIDAIS EKTLNFTVAL 180 181 TAGRGRGKSA ALGISIAAAV SHGYSNIFVT SPSPENLKTL FEFIFKGFDA LGYQEHIDYD 240 241 IIQSTNPDFN KAIVRVDIKR DHRQTIQYIV PQDHQVLGQA ELVVIDEAAA IPLPIVKNLL 300 301 GPYLVFMAST INGYEGTGRS LSLKLIQQLR NQNNTSGRES TQTAVVSRDN KEKDSHLHSQ 360 361 SRQLREISLD EPIRYAPGDP IEKWLNKLLC LDVTLIKNPR FATRGTPHPS QCNLFVVNRD 420 421 TLFSYHPVSE NFLEKMMALY VSSHYKNSPN DLQLMSDAPA HKLFVLLPPI DPKDGGRIPD 480 481 PLCVIQIALE GEISKESVRN SLSRGQRAGG DLIPWLISQQ FQDEEFASLS GARIVRIATN 540 541 PEYASMGYGS RAIELLRDYF EGKFTDMSED VRPKDYSIKR VSDKELAKTN LLKDDVKLRD 600 601 AKTLPPLLLK LSEQPPHYL |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [721-814] |
1 11 21 31 41 51 | | | | | | 1 HYLGVSYGLT QSLHKFWKNN SFVPVYLRQT ANDLTGEHTC VMLNVLEGRE SNWLVEFAKD 60 61 FRKRFLSLLS YDFHKFTAVQ ALSVIESSKK AQDL |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Term | Confidence | Notes |
structural constituent of ribosome | 2.58352785213483 | bayes_pls_golite062009 |
binding | 2.3830857772509 | bayes_pls_golite062009 |
structural molecule activity | 1.70306030734033 | bayes_pls_golite062009 |
RNA helicase activity | 1.40594009629203 | bayes_pls_golite062009 |
ATP-dependent RNA helicase activity | 1.38650114394757 | bayes_pls_golite062009 |
RNA-dependent ATPase activity | 1.372924601535 | bayes_pls_golite062009 |
helicase activity | 1.17712281740941 | bayes_pls_golite062009 |
ATP-dependent helicase activity | 1.12969667337016 | bayes_pls_golite062009 |
purine NTP-dependent helicase activity | 1.12969667337016 | bayes_pls_golite062009 |
RNA binding | 0.90930722867621 | bayes_pls_golite062009 |
nucleic acid binding | 0.61841039337932 | bayes_pls_golite062009 |
0.506052368661833 | bayes_pls_golite062009 | |
DNA binding | 0.327221599656875 | bayes_pls_golite062009 |
transcription regulator activity | 0.179080000736404 | bayes_pls_golite062009 |
protein binding | 0.102043618157662 | bayes_pls_golite062009 |
nucleoside-triphosphatase activity | 0.0283323446458181 | bayes_pls_golite062009 |
Region A: Residues: [815-1056] |
1 11 21 31 41 51 | | | | | | 1 SDDEKHDNKE LTRTHLDDIF SPFDLKRLDS YSNNLLDYHV IGDMIPMLAL LYFGDKMGDS 60 61 VKLSSVQSAI LLAIGLQRKN IDTIAKELNL PSNQTIAMFA KIMRKMSQYF RQLLSQSIEE 120 121 TLPNIKDDAI AEMDGEEIKN YNAAEALDQM EEDLEEAGSE AVQAMREKQK ELINSLNLDK 180 181 YAINDNSEEW AESQKSLEIA AKAKGVVSLK TGKKRTTEKA EDIYRQEMKA MKKPRKSKKA 240 241 AN |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.