| Protein: | KRE33 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1056 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KRE33.
| Description | E-value | Query Range |
Subject Range |
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0.0 | [1..1056] | [1..1010] |
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0.0 | [3..1006] | [2..971] |
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0.0 | [1..1053] | [1..1030] |
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0.0 | [3..1041] | [2..1025] |
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0.0 | [1..1056] | [1..1056] |
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Region A: Residues: [1-101] |
1 11 21 31 41 51
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1 MAKKAIDSRI PSLIRNGVQT KQRSIFVIVG DRARNQLPNL HYLMMSADLK MNKSVLWAYK 60
61 KKLLGFTSHR KKRENKIKKE IKRGTREVNE MDPFESFISN Q
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| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.527 | d.68.3 | SirA-like |
| View | Download | 0.410 | c.23.6 | Cobalamin (vitamin B12)-binding domain |
| View | Download | 0.513 | c.5.1 | MurCD N-terminal domain |
| View | Download | 0.474 | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| View | Download | 0.403 | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| View | Download | 0.402 | b.1.1 | Immunoglobulin |
| View | Download | 0.386 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.358 | c.78.1 | Aspartate/ornithine carbamoyltransferase |
| View | Download | 0.349 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.340 | c.47.1 | Thioredoxin-like |
| View | Download | 0.313 | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.295 | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.279 | a.91.1 | Regulator of G-protein signalling, RGS |
| View | Download | 0.275 | c.54.1 | IIA domain of mannose transporter, IIA-Man |
| View | Download | 0.258 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.254 | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.253 | d.68.7 | R3H domain |
| View | Download | 0.253 | c.30.1 | PreATP-grasp domain |
| View | Download | 0.245 | c.23.8 | N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |
| View | Download | 0.243 | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
| View | Download | 0.229 | a.118.8 | TPR-like |
| View | Download | 0.224 | c.114.1 | YchN-like |
| View | Download | 0.216 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.211 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
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Region A: Residues: [102-720] |
1 11 21 31 41 51
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1 NIRYVYYKES EKILGNTYGM CILQDFEALT PNLLARTIET VEGGGIVVIL LKSMSSLKQL 60
61 YTMTMDVHAR YRTEAHGDVV ARFNERFILS LGSNPNCLVV DDELNVLPLS GAKNVKPLPP 120
121 KEDDELPPKQ LELQELKESL EDVQPAGSLV SLSKTVNQAH AILSFIDAIS EKTLNFTVAL 180
181 TAGRGRGKSA ALGISIAAAV SHGYSNIFVT SPSPENLKTL FEFIFKGFDA LGYQEHIDYD 240
241 IIQSTNPDFN KAIVRVDIKR DHRQTIQYIV PQDHQVLGQA ELVVIDEAAA IPLPIVKNLL 300
301 GPYLVFMAST INGYEGTGRS LSLKLIQQLR NQNNTSGRES TQTAVVSRDN KEKDSHLHSQ 360
361 SRQLREISLD EPIRYAPGDP IEKWLNKLLC LDVTLIKNPR FATRGTPHPS QCNLFVVNRD 420
421 TLFSYHPVSE NFLEKMMALY VSSHYKNSPN DLQLMSDAPA HKLFVLLPPI DPKDGGRIPD 480
481 PLCVIQIALE GEISKESVRN SLSRGQRAGG DLIPWLISQQ FQDEEFASLS GARIVRIATN 540
541 PEYASMGYGS RAIELLRDYF EGKFTDMSED VRPKDYSIKR VSDKELAKTN LLKDDVKLRD 600
601 AKTLPPLLLK LSEQPPHYL
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
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Region A: Residues: [721-814] |
1 11 21 31 41 51
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1 HYLGVSYGLT QSLHKFWKNN SFVPVYLRQT ANDLTGEHTC VMLNVLEGRE SNWLVEFAKD 60
61 FRKRFLSLLS YDFHKFTAVQ ALSVIESSKK AQDL
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.754 | 0.078 | nucleolus | d.80.1 | Tautomerase/MIF |
| View | Download | 0.747 | 0.021 | nucleolus | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.503 | 0.014 | nucleolus | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.469 | N/A | N/A | b.40.2 | Bacterial enterotoxins |
| View | Download | 0.438 | N/A | N/A | d.67.2 | Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |
| View | Download | 0.409 | N/A | N/A | b.36.1 | PDZ domain-like |
| View | Download | 0.398 | N/A | N/A | d.15.1 | Ubiquitin-like |
| View | Download | 0.397 | N/A | N/A | b.84.2 | Rudiment single hybrid motif |
| View | Download | 0.393 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.382 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.382 | N/A | N/A | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.381 | N/A | N/A | d.58.5 | GlnB-like |
| View | Download | 0.378 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.368 | N/A | N/A | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.367 | N/A | N/A | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.366 | N/A | N/A | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.365 | N/A | N/A | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.364 | N/A | N/A | d.58.43 | Mechanosensitive channel protein MscS (YggB), C-terminal domain |
| View | Download | 0.359 | N/A | N/A | c.55.4 | Translational machinery components |
| View | Download | 0.348 | N/A | N/A | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.336 | N/A | N/A | c.44.2 | Enzyme IIB-cellobiose |
| View | Download | 0.335 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.335 | N/A | N/A | a.112.1 | Description not found. |
| View | Download | 0.334 | N/A | N/A | b.40.2 | Bacterial enterotoxins |
| View | Download | 0.315 | N/A | N/A | d.64.1 | eIF1-like |
| View | Download | 0.314 | N/A | N/A | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.311 | N/A | N/A | d.21.1 | Diaminopimelate epimerase-like |
| View | Download | 0.304 | N/A | N/A | d.87.1 | FAD/NAD-linked reductases, dimerisation (C-terminal) domain |
| View | Download | 0.303 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.295 | N/A | N/A | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
| View | Download | 0.295 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.287 | N/A | N/A | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.287 | N/A | N/A | d.58.19 | Bacterial exopeptidase dimerisation domain |
| View | Download | 0.283 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.283 | N/A | N/A | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.279 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.278 | N/A | N/A | d.27.1 | Ribosomal protein S16 |
| View | Download | 0.276 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.272 | N/A | N/A | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.253 | N/A | N/A | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.246 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.245 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.243 | N/A | N/A | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.241 | N/A | N/A | c.30.1 | PreATP-grasp domain |
| View | Download | 0.240 | N/A | N/A | d.20.1 | UBC-like |
| View | Download | 0.229 | N/A | N/A | d.52.6 | BolA-like |
| View | Download | 0.227 | N/A | N/A | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.226 | N/A | N/A | d.58.25 | Killer toxin KP6 alpha-subunit |
| View | Download | 0.225 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.222 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.222 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.211 | N/A | N/A | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.205 | N/A | N/A | c.23.1 | CheY-like |
| Term | Confidence | Notes |
| structural constituent of ribosome | 2.58352785213483 | bayes_pls_golite062009 |
| binding | 2.3830857772509 | bayes_pls_golite062009 |
| structural molecule activity | 1.70306030734033 | bayes_pls_golite062009 |
| RNA helicase activity | 1.40594009629203 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 1.38650114394757 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 1.372924601535 | bayes_pls_golite062009 |
| helicase activity | 1.17712281740941 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 1.12969667337016 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 1.12969667337016 | bayes_pls_golite062009 |
| RNA binding | 0.90930722867621 | bayes_pls_golite062009 |
| nucleic acid binding | 0.61841039337932 | bayes_pls_golite062009 |
| 0.506052368661833 | bayes_pls_golite062009 | |
| DNA binding | 0.327221599656875 | bayes_pls_golite062009 |
| transcription regulator activity | 0.179080000736404 | bayes_pls_golite062009 |
| protein binding | 0.102043618157662 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.0283323446458181 | bayes_pls_golite062009 |
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Region A: Residues: [815-1056] |
1 11 21 31 41 51
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1 SDDEKHDNKE LTRTHLDDIF SPFDLKRLDS YSNNLLDYHV IGDMIPMLAL LYFGDKMGDS 60
61 VKLSSVQSAI LLAIGLQRKN IDTIAKELNL PSNQTIAMFA KIMRKMSQYF RQLLSQSIEE 120
121 TLPNIKDDAI AEMDGEEIKN YNAAEALDQM EEDLEEAGSE AVQAMREKQK ELINSLNLDK 180
181 YAINDNSEEW AESQKSLEIA AKAKGVVSLK TGKKRTTEKA EDIYRQEMKA MKKPRKSKKA 240
241 AN
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
