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View Structure Prediction Details

Protein: SIW14
Organism: Saccharomyces cerevisiae
Length: 281 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SIW14.

Description E-value Query
Range
Subject
Range
SIW14_YEAST - Tyrosine-protein phosphatase SIW14 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SIW14...
SIW14 - Tyrosine phosphatase that plays a role in actin filament organization and endocytosis; localized to ...
2.0E-91 [1..281] [1..281]
gi|15810022, gi|... - gi|26452426|dbj|BAC43298.1| unknown protein [Arabidopsis thaliana], gi|21555065|gb|AAM63767.1| conta...
5.0E-41 [117..271] [30..183]
gi|76363712 - gi|76363712|ref|XP_888539.1| hypothetical protein [Leishmania major strain Friedlin]
gi|15027525 - gi|15027525|emb|CAC44917.1| conserved hypothetical protein [Leishmania major]
9.0E-39 [109..279] [4..173]
gi|7413671 - gi|7413671|emb|CAB85704.1| protein phosphatase [Candida albicans]
3.0E-33 [67..263] [145..325]

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Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLYQAKNDE GSDPKSSSKI DDLIENEAEI IRLIKEDGKL LIDNGDGRDI HNIIQEDKLL  60
   61 SVEFNEVLKR FHGEEKSDIP RKEF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [85-179]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DEDEDDGYDS NEHHQKTIEV MNTLNHVINK EVIPPENFSH VVGEIYRSSF PRQENFSFLH  60
   61 ERLKLKSILV LIPEEYPQEN LNFLKLTGIK LYQVG

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [197-218]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KALEIVLNPA NQPILIHCNR GK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.69897
Match: 1d5rA_
Description: Pten tumor suppressor (Phoshphoinositide phosphatase), C-terminal domain; Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoprotein phosphatase activity 7.30669036331612 bayes_pls_golite062009
phosphatase activity 6.6585143972081 bayes_pls_golite062009
phosphoric ester hydrolase activity 6.44546424348532 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 5.56007278295923 bayes_pls_golite062009
protein tyrosine phosphatase activity 5.3097342170423 bayes_pls_golite062009
transmembrane receptor protein phosphatase activity 2.94635032478625 bayes_pls_golite062009
transmembrane receptor protein tyrosine phosphatase activity 2.94635032478625 bayes_pls_golite062009
protein tyrosine/serine/threonine phosphatase activity 2.77531895423367 bayes_pls_golite062009
protein serine/threonine phosphatase activity 1.95004535887255 bayes_pls_golite062009
hydrolase activity 1.5596484415033 bayes_pls_golite062009
protein binding 1.28180613509993 bayes_pls_golite062009
binding 1.27238793273026 bayes_pls_golite062009
inositol or phosphatidylinositol phosphatase activity 1.1200449509328 bayes_pls_golite062009
catalytic activity 1.06283028154109 bayes_pls_golite062009
lipid phosphatase activity 1.05085928819585 bayes_pls_golite062009
non-membrane spanning protein tyrosine phosphatase activity 0.724257798127697 bayes_pls_golite062009
cytoskeletal protein binding 0.541577955624444 bayes_pls_golite062009
actin binding 0.174917691236515 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.0776644624761281 bayes_pls_golite062009
kinase activity 0.0715870881653981 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [180-196]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGNKEPFVN IPSHLLT

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [219-281]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HRTGCLIGCI RKLQNWSLTM IFDEYRRFAF PKARALDQQF IEMYDDDEIK RIASKNNWLP  60
   61 LQW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.69897
Match: 1d5rA_
Description: Pten tumor suppressor (Phoshphoinositide phosphatase), C-terminal domain; Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle