| Protein: | ECM38 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 660 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ECM38.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..660] | [1..660] |
|
|
0.0 | [96..660] | [28..568] |
|
|
0.0 | [96..660] | [28..568] |
|
|
0.0 | [96..660] | [28..568] |
|
|
0.0 | [96..660] | [28..569] |
|
|
0.0 | [96..660] | [28..568] |
|
|
0.0 | [93..660] | [27..568] |
|
Region A: Residues: [1-274] |
1 11 21 31 41 51
| | | | | |
1 MLLCNRKVPK TLNTCFILHI FTLLTLGVLV SGMPSKMVSF ASQETLQRIN NLLRGSANRD 60
61 VDIIAEYLKK DDDDDGGDKD HHNIDIDPLP RRPSLTPDRQ LLKVGLHGAI SSDLEVCSNL 120
121 TINEVLLKFP GSNAADAAVT QALCKGMVNF FNSGIGGGGY VVFSGKDDED HLSIDFREKA 180
181 PMDSHKFMFE NCSLCSKIGG LAVGVPGELM GLYRLFKERG SGQVDWRDLI EPVAKLGSVG 240
241 WQIGEALGAT LELYEDVFLT LKEDWSFVLN STHD
|
| Detection Method: |  |
| Confidence: | 8.46 |
| Match: | 1itwA |
| Description: | Monomeric isocitrate dehydrogenase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [275-440] |
1 11 21 31 41 51
| | | | | |
1 GVLKEGDWIK RPALSNMLME LAKNGSVAPF YDPDHWIAKS MIDTVAKYNG IMNLQDVSSY 60
61 DVHVTKPLSM KIRKGANFIP DNDMTVLTSS GSSSGAALLA ALRIMDNFQN QEGGDYEKET 120
121 TYHLLESMKW MASARSRLGD FEGEALPKHI EEVLDPEWAL KAVKSI
|
| Detection Method: | |
| Confidence: | 8.46 |
| Match: | 1itwA |
| Description: | Monomeric isocitrate dehydrogenase |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [441-660] |
1 11 21 31 41 51
| | | | | |
1 KRNSQDGNFK TLENWTLYDP AYDINNPHGT AHFSIVDSHG NAVSLTTTIN LLFGSLVHDP 60
61 KTGVIFNNEM DDFAQFNKSN SFELAPSIYN FPEPGKRPLS STAPTIVLSE LGIPDLVVGA 120
121 SGGSRITTSV LQTIVRTYWY NMPILETIAY PRIHHQLLPD RIELESFPMI GKAVLSTLKE 180
181 MGYTMKEVFP KSVVNAIRNV RGEWHAVSDY WRKRGISSVY
|
| Detection Method: | |
| Confidence: | 7.75 |
| Match: | 9gaaA |
| Description: | Glycosylasparaginase (aspartylglucosaminidase, AGA) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 2.36621306284094 | bayes_pls_golite062009 |
| hydrolase activity | 2.34679426809641 | bayes_pls_golite062009 |
| gamma-glutamyltransferase activity | 2.21821955124661 | bayes_pls_golite062009 |
| transferase activity, transferring amino-acyl groups | 2.09518916120707 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 2.05417833810024 | bayes_pls_golite062009 |
| endopeptidase activity | 1.98364900190373 | bayes_pls_golite062009 |
| catalytic activity | 1.1186710875396 | bayes_pls_golite062009 |
| binding | 0.834657684213424 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.050580993362788 | bayes_pls_golite062009 |
| protein binding | 0.0330711408938561 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.0152030928962795 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.00707009173217921 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.00389570308650089 | bayes_pls_golite062009 |
