| Protein: | NOC3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 663 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NOC3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..663] | [1..663] |
|
|
0.0 | [4..657] | [68..713] |
|
|
0.0 | [4..657] | [68..714] |
|
|
0.0 | [39..655] | [121..742] |
|
|
0.0 | [22..657] | [88..706] |
|
|
0.0 | [286..657] | [4..345] |
|
|
5.0E-93 | [128..663] | [4..516] |
|
Region A: Residues: [1-111] |
1 11 21 31 41 51
| | | | | |
1 MAKRNRSQFR IQERTAKKRK HEDSLLEGNV FQNAPEDMDE NTIYSAKGSS WDEEEQDYEM 60
61 VPRKNRSDTS NLVEGLPIKV NGKVERKLHK AQEKPKDDDE EDEDSNDSSE D
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| RNA binding | 3.36069436734718 | bayes_pls_golite062009 |
| binding | 2.36800795249393 | bayes_pls_golite062009 |
| nucleic acid binding | 1.67566088591721 | bayes_pls_golite062009 |
| structural molecule activity | 1.49650156618775 | bayes_pls_golite062009 |
| protein binding | 1.3800948965226 | bayes_pls_golite062009 |
| mRNA binding | 1.35186555044783 | bayes_pls_golite062009 |
| transcription regulator activity | 1.08645493064764 | bayes_pls_golite062009 |
| DNA binding | 0.806448013051712 | bayes_pls_golite062009 |
| transcription factor activity | 0.371244009721798 | bayes_pls_golite062009 |
|
Region A: Residues: [112-263] |
1 11 21 31 41 51
| | | | | |
1 DEGPNEEQEA EAKEDEPDTE EKILQLKEDI ADLVTKVMEE PEENTAALGR LCKMVESKNP 60
61 NTCKFSMLAL VPVFKSIIPG YRIRPLTETE KKEKVSKEVS KLRNFEQALV YNYKNYVGRL 120
121 QSLSKTPSNA APIQVSLGIL ATQAAKELIS TA
|
| Detection Method: | |
| Confidence: | 9.86 |
| Match: | 1b3uA |
| Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [264-329] |
1 11 21 31 41 51
| | | | | |
1 SHFNFRTDIF TLLLRRICKP RISTDPTSIQ IIQTFETLLN EDEEGSISFE ILRIFNKILK 60
61 TRNFNI
|
| Detection Method: | |
| Confidence: | 9.86 |
| Match: | 1b3uA |
| Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [330-470] |
1 11 21 31 41 51
| | | | | |
1 EESVLNMLLS LDVLHDYDPN TKLKGNVSAP KLKKKDRVHL SKKQRKARKE MQQIEEEMRN 60
61 AEQAVSAEER ERNQSEILKI VFTIYLNILK NNAKTLIGSV LEGLTKFGNM ANFDLLGDFL 120
121 EVMKELISDT EFDNLSSAEV R
|
| Detection Method: | |
| Confidence: | 9.86 |
| Match: | 1b3uA |
| Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [471-663] |
1 11 21 31 41 51
| | | | | |
1 KALLCIVSAF SLISNTQYMK VNVDLSKFVD GLYALLPYIC LDADIELSYR SLRLADPLNN 60
61 EIIKPSVNVS TKAELLLKAL DHVFFRSKSG TKERATAFTK RLYMCISHTP EKTSIAILKF 120
121 IDKLMNRYPE ISGLYSSEDR IGNGHFIMEA DNPSRSNPEA ATLWDNALLE KHYCPVVTKG 180
181 LRSLSSRSKE CSK
|
| Detection Method: | |
| Confidence: | 9.86 |
| Match: | 1b3uA |
| Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
| Matching Structure (courtesy of the PDB): |
|
