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Protein Overview: CE29708

General Information:
Name(s) found: CE29708 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00016508 Nucleolar complex protein 3 homolog status:Partially_confirmed UniProt:P91136 protein_id:CCD66984.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 778 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    oviposition [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFASASREE KLKMLKTNKT RKTTKHLNRL AKRKKLSREI RDGMADIKSR KSADLRQRAV  60
   61 NIEDDFIADR QAHYENSDED LPLDMMDADI DWENSAFANA KRRLEKKRSG VESDSDDEDD 120
  121 VEKKKRKFAG LLEEGHEELL PIKLKDGTLI RPTREKEVKE DEEEKSGDEE EEGEEDEPHR 180
  181 EDFSHLSASE LIAKRRELMQ EFKDTIASHA NMLLSNPQVN IVRLRDLYNL CNGEKIHSLV 240
  241 RESVQKLAIA STLQVLLDIL PGYAIREQTA EEKAQKQKKE TRNLVNYEES LLRYHLKYLQ 300
  301 LCEKLSNKLV GKDRHNDEST FTFKMGILSV KALARIVVSA PHFNYSTNIV SSLVRLSLAK 360
  361 NETVIREVCE AIRTVFKEDI HLKITLFTAR SISTLVTKRK GRVPPELLRT LLSMNITEVK 420
  421 DEDKKSGKDA LIAKKYQIKK EKASKTAKKY KKQLARLEAD LLEVEAEESM SKKLKNATEA 480
  481 MKFAFQSYFS ILKRMPNSAL LEPVLEGLSK FAHLLSIEFY EDIVSTMENM VQNENLKSLD 540
  541 QLHCINTVFV ILSGDGQLLN IDPSKFYRLA YRVLNHLPFE KRPEQRKNQI IMAAKTLETM 600
  601 LVIRRKAVPL SRVAAFVKRL LSIATVLDDF PALCIVSLVR SLFIAHPKLS SMIEDEEGGA 660
  661 PGIYRPDIDD PDVANALASD VRDELSMLAR RRNTELSRFA NNILYGVPST GIFKLNPQLS 720
  721 SLKPWILMGQ LMDNAKDAYD KVESKYLDDL EKAAKKRNQS VTPKNINFHI SNWLAASK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..317] PSI-BLAST 13.221849 Heavy meromyosin subfragment
    2 View Details [318..778] FFAS03 0.977 Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.4227425773296 bayes_pls_golite062009
  • protein binding
    		•  0.79300810988911 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle