| Protein: | NFT1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1218 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NFT1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1218] | [1..1218] |
|
|
0.0 | [282..1217] | [21..953] |
|
|
0.0 | [280..1217] | [20..961] |
|
|
0.0 | [282..1217] | [21..957] |
|
|
0.0 | [282..1217] | [26..966] |
|
|
0.0 | [264..1217] | [11..969] |
|
|
0.0 | [271..1217] | [10..958] |
|
Region A: Residues: [1-268] |
1 11 21 31 41 51
| | | | | |
1 MIKNGTCPYW ERDDLSECAR REYIEFKFPL FILLTGMIYA FCKVFRAFYL RGKNHTNEAP 60
61 EFEEQGNGNH EYARFSVLRL KSAWESRSFC NVNNRSTFDK FKKFIEGAFI VLQLTIHLYI 120
121 LSSMPMDNKK FFHQGFLVQM FLWILLLVVI TLRLISASQS FRWVLACKRD LWAVSFYSYA 180
181 SLFTLSILPL RSVFIGKIKD KIMVKYIISE TFIDLALLLL LSTSSIEGTR YSFLVENENK 240
241 KLPPAPTVFG LLTFSRIDRL IWKAYKHC
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [269-406] |
1 11 21 31 41 51
| | | | | |
1 LGNADIWDLD INNKSIAILA NFEMSSKKGR LLPNIICYFK AVFISQLFLA FVSSFLNFVP 60
61 SLLMPRILSY VNDPKSKSWN LVSLYVSSML VSKIIATTCR GQGLFLGEKG TMQLRTVLIS 120
121 NIYSKTLRRT ILKDSTTS
|
|
Region B: Residues: [439-634] |
1 11 21 31 41 51
| | | | | |
1 NVMSIDAFKV SEAMNTFYLA CEAVFMTVTA LMILYSLLGW SAFAGTFALL AMIPLNFWCA 60
61 TFYGNYQADQ LILTDKRTSG ISEALNSIRV IKLLAWENLF YQKIINVRDG EIRLLKKKAT 120
121 IFFLNHLIWF FGPTLVSAIT FSVFIKFQNQ TLTPTIAFTA LSLFAILRTP MDQIASTVSL 180
181 LIQSFISLER IQDYLN
|
| Detection Method: | |
| Confidence: | 333.9897 |
| Match: | 1jsqA_ |
| Description: | MsbA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [407-438] |
1 11 21 31 41 51
| | | | | |
1 LQKNASTSFE ENPDSSEAEP RKKSSRKDNS VN
|
|
Region B: Residues: [635-909] |
1 11 21 31 41 51
| | | | | |
1 ESETRKYEIL EQSNTKFGFE DASMEWEAAE TSFKLKNISI DFKLNSLNAI IGPTGSGKSS 60
61 LLLGLLGELN LLSGKIYVPT VESRDDLEIG KDGMTNSMAY CSQTPWLISG TIKDNVVFGE 120
121 IFNKQKFDDV MKSCCLDKDI KAMTAGIRTD VGDGGFSLSG GQQQRIALAR AIYSSSRYLI 180
181 LDDCLSAVDP ETALYIYEEC LCGPMMKGRT CIITSHNISL VTKRADWLVI LDRGEVKSQG 240
241 KPSDLIKSNE FLRESINNDS KNTTHNQIDL KRSTT
|
| Detection Method: | |
| Confidence: | 333.9897 |
| Match: | 1jsqA_ |
| Description: | MsbA |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ATPase activity, coupled to transmembrane movement of substances | 5.57844095962502 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 5.57813579764186 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 5.57813579764186 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 5.5689620139321 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 5.55992639965745 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 5.50005167063544 | bayes_pls_golite062009 |
| ATPase activity, coupled | 4.98276715440477 | bayes_pls_golite062009 |
| ATPase activity | 4.69795387297193 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 4.45923622153365 | bayes_pls_golite062009 |
| pyrophosphatase activity | 4.39781350157199 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 4.38133275795019 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 4.38085303582726 | bayes_pls_golite062009 |
| transporter activity | 3.71239480053329 | bayes_pls_golite062009 |
| hydrolase activity | 3.14498892233323 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.13960906549884 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.1318898376276 | bayes_pls_golite062009 |
| ATP binding | 3.01346604299372 | bayes_pls_golite062009 |
| drug transmembrane transporter activity | 2.97119034312001 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 2.96271391116269 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 2.91131545957759 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 2.70262534541085 | bayes_pls_golite062009 |
| ribonucleotide binding | 2.70178191749524 | bayes_pls_golite062009 |
| purine nucleotide binding | 2.6583477492092 | bayes_pls_golite062009 |
| nucleotide binding | 2.62374702628143 | bayes_pls_golite062009 |
| 2.20174656498665 | bayes_pls_golite062009 | |
| lipid transporter activity | 1.74534601529986 | bayes_pls_golite062009 |
| peptide-transporting ATPase activity | 1.37783759788533 | bayes_pls_golite062009 |
| peptide transporter activity | 1.19353064661766 | bayes_pls_golite062009 |
| binding | 1.18037907589281 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.08692822631118 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.977237423302079 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.557919489256916 | bayes_pls_golite062009 |
| hydrogen ion transporting ATP synthase activity, rotational mechanism | 0.213018989352421 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 0.123304946374679 | bayes_pls_golite062009 |
| motor activity | 0.0492636236578701 | bayes_pls_golite062009 |
|
Region A: Residues: [910-997] |
1 11 21 31 41 51
| | | | | |
1 SKKTKNGDPE GGNSQDEVCA EVENFEETKM EGSVKFSAYK WLADYFGGLG VVFVFTSSSI 60
61 LIHGITLSQG FWLRYWLDTG SSGSKSTW
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.575 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.490 | d.39.1 | Dynein light chain 8 (DLC8) |
| View | Download | 0.433 | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.446 | d.206.1 | YggU-like |
| View | Download | 0.482 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.411 | d.39.1 | Dynein light chain 8 (DLC8) |
| View | Download | 0.406 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.405 | d.105.1 | Clathrin adaptor appendage, alpha and beta chain-specific domain |
| View | Download | 0.405 | a.135.1 | Tetraspanin |
| View | Download | 0.402 | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.386 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.371 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.370 | d.17.1 | Cystatin/monellin |
| View | Download | 0.367 | a.83.1 | Guanido kinase N-terminal domain |
| View | Download | 0.359 | b.7.3 | PHL pollen allergen |
| View | Download | 0.356 | d.102.1 | Regulatory factor Nef |
| View | Download | 0.352 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.351 | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.348 | a.77.1 | DEATH domain |
| View | Download | 0.346 | a.77.1 | DEATH domain |
| View | Download | 0.340 | d.52.1 | Alpha-lytic protease prodomain |
| View | Download | 0.333 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.327 | a.4.1 | Homeodomain-like |
| View | Download | 0.320 | d.1.1 | Microbial ribonucleases |
| View | Download | 0.319 | d.105.1 | Clathrin adaptor appendage, alpha and beta chain-specific domain |
| View | Download | 0.319 | d.58.17 | Metal-binding domain |
| View | Download | 0.317 | d.38.1 | Thioesterase/thiol ester dehydrase-isomerase |
| View | Download | 0.316 | b.1.1 | Immunoglobulin |
| View | Download | 0.315 | d.131.1 | DNA clamp |
| View | Download | 0.302 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.301 | d.95.2 | Homing endonucleases |
| View | Download | 0.299 | b.7.3 | PHL pollen allergen |
| View | Download | 0.297 | b.1.6 | Cadherin |
| View | Download | 0.294 | d.8.1 | Urease, gamma-subunit |
| View | Download | 0.288 | d.129.2 | Phosphoglucomutase, C-terminal domain |
| View | Download | 0.284 | d.237.1 | Hypothetical protein YjiA, C-terminal domain |
| View | Download | 0.282 | a.74.1 | Cyclin-like |
| View | Download | 0.281 | d.93.1 | SH2 domain |
| View | Download | 0.268 | d.53.1 | Ribosomal protein S3 C-terminal domain |
| View | Download | 0.267 | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.264 | d.110.1 | Profilin (actin-binding protein) |
| View | Download | 0.263 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.263 | d.32.1 | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
| View | Download | 0.263 | d.105.1 | Clathrin adaptor appendage, alpha and beta chain-specific domain |
| View | Download | 0.254 | b.24.1 | Hyaluronate lyase-like, C-terminal domain |
| View | Download | 0.245 | b.1.14 | Invasin/intimin cell-adhesion fragments |
| View | Download | 0.244 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.243 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.231 | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.231 | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.224 | a.17.1 | p8-MTCP1 |
| View | Download | 0.223 | g.41.3 | Zinc beta-ribbon |
| View | Download | 0.223 | g.3.7 | Scorpion toxin-like |
| View | Download | 0.220 | a.4.1 | Homeodomain-like |
| View | Download | 0.215 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.214 | d.95.2 | Homing endonucleases |
| View | Download | 0.213 | d.95.2 | Homing endonucleases |
| View | Download | 0.208 | d.1.1 | Microbial ribonucleases |
| View | Download | 0.208 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.206 | d.105.1 | Clathrin adaptor appendage, alpha and beta chain-specific domain |
| View | Download | 0.205 | d.38.1 | Thioesterase/thiol ester dehydrase-isomerase |
| View | Download | 0.204 | b.38.2 | YhbC-like, C-terminal domain |
| View | Download | 0.203 | b.55.1 | PH domain-like |
|
Region A: Residues: [998-1218] |
1 11 21 31 41 51
| | | | | |
1 LYRIVEGHSN IYFLLTYIII GLVSSFLTSG KVWIAIISGT NVTKKIFAKL LSSILYAKLR 60
61 FHNVTPTGRI MNRFSKDMDI IDQQLIPNFE GLSYSVVVCL WIILLIGYVT PQFLLFAIPL 120
121 CALYYTVCTL YLRASRELKR IDNINISPIH QLFAEAIKGV TTIRALADER RFITQSLVAI 180
181 DRSNAPFFYL NMATEWITYR VDIIGTLVLF SSSVMIIMKA S
|
| Detection Method: | |
| Confidence: | 7.95 |
| Match: | 1qu7A |
| Description: | Cytoplasmic domain of a serine chemotaxis receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ATPase activity, coupled to transmembrane movement of substances | 5.4467861893359 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 5.44654566127945 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 5.44654566127945 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 5.43909190876515 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 5.4304944906989 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 5.38112407181712 | bayes_pls_golite062009 |
| ATPase activity, coupled | 4.87869064889244 | bayes_pls_golite062009 |
| ATPase activity | 4.60773943958528 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 4.38591214726007 | bayes_pls_golite062009 |
| pyrophosphatase activity | 4.32673473878039 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 4.31087891816858 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 4.31037981322306 | bayes_pls_golite062009 |
| transporter activity | 3.47953169973151 | bayes_pls_golite062009 |
| hydrolase activity | 3.11706952898443 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.94175800357966 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.90743799425416 | bayes_pls_golite062009 |
| ATP binding | 2.83986218503994 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 2.79195527951815 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 2.74359323245512 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 2.55506944753783 | bayes_pls_golite062009 |
| ribonucleotide binding | 2.55426312645972 | bayes_pls_golite062009 |
| purine nucleotide binding | 2.51344800975739 | bayes_pls_golite062009 |
| nucleotide binding | 2.48057252852174 | bayes_pls_golite062009 |
| lipid transporter activity | 1.22217924457225 | bayes_pls_golite062009 |
| binding | 1.15406183540658 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.04118164915515 | bayes_pls_golite062009 |
