| Protein: | GZF3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 551 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GZF3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..551] | [1..551] |
|
|
3.0E-45 | [6..419] | [625..1037] |
|
|
2.0E-39 | [74..180] | [1..108] |
|
|
4.0E-39 | [73..186] | [2..116] |
|
|
1.0E-37 | [76..191] | [2..119] |
|
|
6.0E-35 | [3..341] | [49..399] |
|
|
2.0E-33 | [2..330] | [44..369] |
|
|
3.0E-33 | [3..189] | [42..223] |
|
|
6.0E-33 | [63..205] | [59..200] |
|
Region A: Residues: [1-123] |
1 11 21 31 41 51
| | | | | |
1 MASQATTLRG YNIRKRDNVF EPKSSENLNS LNQSEEEGHI GRWPPLGYEA VSAEQKSAVQ 60
61 LRESQAGASI SNNMNFKAND KSFSTSTAGR MSPDTNSLHH ILPKNQVKNN GQTMDANCNN 120
121 NVS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [124-192] |
1 11 21 31 41 51
| | | | | |
1 NDANVPVCKN CLTSTTPLWR RDEHGAMLCN ACGLFLKLHG KPRPISLKTD VIKSRNRKSN 60
61 TNHAHNLDN
|
| Detection Method: | |
| Confidence: | 173.68867 |
| Match: | 4gatA_ |
| Description: | Erythroid transcription factor GATA-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.00967542385368 | bayes_pls_golite062009 |
| DNA binding | 3.60745514727532 | bayes_pls_golite062009 |
| nucleic acid binding | 3.47256374293954 | bayes_pls_golite062009 |
| binding | 2.96409924710655 | bayes_pls_golite062009 |
| transcription factor activity | 2.90769972671972 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.40923942043513 | bayes_pls_golite062009 |
| transcription repressor activity | 1.88834375049208 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.62841402245495 | bayes_pls_golite062009 |
| transcription activator activity | 1.62405765585032 | bayes_pls_golite062009 |
| ligand-dependent nuclear receptor activity | 1.49515149729803 | bayes_pls_golite062009 |
| protein binding | 1.39455913713025 | bayes_pls_golite062009 |
| transcription factor binding | 1.38523780690867 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.26452462867497 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.68943696300126 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.58115018700114 | bayes_pls_golite062009 |
| catalytic activity | 0.101795606736461 | bayes_pls_golite062009 |
|
Region A: Residues: [193-478] |
1 11 21 31 41 51
| | | | | |
1 FRNQTLIAEL KGDCNIESSG RKANRVTSED KKKKSSQLLM GTSSTAKISK KPKTESKERS 60
61 DSHLSATKLE VLMSGDCSRP NLKPKLPKQD TAIYQEKLLT FPSYTDVKEY SNSAHQSAFI 120
121 KERSQFNAAS FPLNASHSVT SKTGADSPQL PHLSMLLGSL SSTSISNNGS EIVSNCNNGI 180
181 ASTAATLAPT SSRTTDSNPS EVPNQIRSTM SSPDIISAKR NDPAPLSFHM ASINDMLETR 240
241 DRAISNVKTE TTPPHFIPFL QSSKAPCISK ANSQSISNSV SSSDVS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [479-551] |
1 11 21 31 41 51
| | | | | |
1 GRKFENHPAK DLGDQLSTKL HKEEEIIKLK TRINELELVT DLYRRHINEL DGKCRALEER 60
61 LQRTVKQEGN KGG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.807 | 0.028 | regulation of nitrogen utilization | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
