| Protein: | GZF3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 551 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GZF3.
| Description | E-value | Query Range |
Subject Range |
|
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0.0 | [1..551] | [1..551] |
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3.0E-45 | [6..419] | [625..1037] |
|
|
2.0E-39 | [74..180] | [1..108] |
|
|
4.0E-39 | [73..186] | [2..116] |
|
|
1.0E-37 | [76..191] | [2..119] |
|
|
6.0E-35 | [3..341] | [49..399] |
|
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2.0E-33 | [2..330] | [44..369] |
|
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3.0E-33 | [3..189] | [42..223] |
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|
6.0E-33 | [63..205] | [59..200] |
|
Region A: Residues: [1-123] |
1 11 21 31 41 51
| | | | | |
1 MASQATTLRG YNIRKRDNVF EPKSSENLNS LNQSEEEGHI GRWPPLGYEA VSAEQKSAVQ 60
61 LRESQAGASI SNNMNFKAND KSFSTSTAGR MSPDTNSLHH ILPKNQVKNN GQTMDANCNN 120
121 NVS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.362 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.305 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.362 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.305 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
|
Region A: Residues: [124-192] |
1 11 21 31 41 51
| | | | | |
1 NDANVPVCKN CLTSTTPLWR RDEHGAMLCN ACGLFLKLHG KPRPISLKTD VIKSRNRKSN 60
61 TNHAHNLDN
|
| Detection Method: | |
| Confidence: | 173.68867 |
| Match: | 4gatA_ |
| Description: | Erythroid transcription factor GATA-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.00967542385368 | bayes_pls_golite062009 |
| DNA binding | 3.60745514727532 | bayes_pls_golite062009 |
| nucleic acid binding | 3.47256374293954 | bayes_pls_golite062009 |
| binding | 2.96409924710655 | bayes_pls_golite062009 |
| transcription factor activity | 2.90769972671972 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.40923942043513 | bayes_pls_golite062009 |
| transcription repressor activity | 1.88834375049208 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.62841402245495 | bayes_pls_golite062009 |
| transcription activator activity | 1.62405765585032 | bayes_pls_golite062009 |
| ligand-dependent nuclear receptor activity | 1.49515149729803 | bayes_pls_golite062009 |
| protein binding | 1.39455913713025 | bayes_pls_golite062009 |
| transcription factor binding | 1.38523780690867 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.26452462867497 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.68943696300126 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.58115018700114 | bayes_pls_golite062009 |
| catalytic activity | 0.101795606736461 | bayes_pls_golite062009 |
|
Region A: Residues: [193-478] |
1 11 21 31 41 51
| | | | | |
1 FRNQTLIAEL KGDCNIESSG RKANRVTSED KKKKSSQLLM GTSSTAKISK KPKTESKERS 60
61 DSHLSATKLE VLMSGDCSRP NLKPKLPKQD TAIYQEKLLT FPSYTDVKEY SNSAHQSAFI 120
121 KERSQFNAAS FPLNASHSVT SKTGADSPQL PHLSMLLGSL SSTSISNNGS EIVSNCNNGI 180
181 ASTAATLAPT SSRTTDSNPS EVPNQIRSTM SSPDIISAKR NDPAPLSFHM ASINDMLETR 240
241 DRAISNVKTE TTPPHFIPFL QSSKAPCISK ANSQSISNSV SSSDVS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [479-551] |
1 11 21 31 41 51
| | | | | |
1 GRKFENHPAK DLGDQLSTKL HKEEEIIKLK TRINELELVT DLYRRHINEL DGKCRALEER 60
61 LQRTVKQEGN KGG
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.716 | 0.061 | regulation of nitrogen utilization | a.77.1 | DEATH domain |
| View | Download | 0.712 | 0.053 | regulation of nitrogen utilization | a.60.1 | SAM/Pointed domain |
| View | Download | 0.807 | 0.028 | regulation of nitrogen utilization | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.581 | 0.003 | regulation of nitrogen utilization | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.697 | N/A | N/A | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.549 | N/A | N/A | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.530 | N/A | N/A | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.516 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.502 | N/A | N/A | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.499 | N/A | N/A | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.498 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.487 | N/A | N/A | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.483 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.478 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.471 | N/A | N/A | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.468 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.464 | N/A | N/A | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.455 | N/A | N/A | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.450 | N/A | N/A | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.449 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.448 | N/A | N/A | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.434 | N/A | N/A | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.433 | N/A | N/A | a.159.2 | FF domain |
| View | Download | 0.428 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.422 | N/A | N/A | a.65.1 | Annexin |
| View | Download | 0.407 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.407 | N/A | N/A | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.398 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.396 | N/A | N/A | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.384 | N/A | N/A | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.382 | N/A | N/A | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.371 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.369 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.368 | N/A | N/A | d.58.49 | YajQ-like |
| View | Download | 0.368 | N/A | N/A | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.365 | N/A | N/A | a.65.1 | Annexin |
| View | Download | 0.358 | N/A | N/A | c.9.1 | Barstar (barnase inhibitor) |
| View | Download | 0.356 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.350 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.346 | N/A | N/A | a.65.1 | Annexin |
| View | Download | 0.343 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.343 | N/A | N/A | d.120.1 | Cytochrome b5 |
| View | Download | 0.341 | N/A | N/A | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.340 | N/A | N/A | a.50.1 | Anaphylotoxins (complement system) |
| View | Download | 0.336 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.334 | N/A | N/A | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.333 | N/A | N/A | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.331 | N/A | N/A | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.331 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.328 | N/A | N/A | d.68.3 | SirA-like |
| View | Download | 0.327 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.321 | N/A | N/A | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.321 | N/A | N/A | a.65.1 | Annexin |
| View | Download | 0.316 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.315 | N/A | N/A | d.50.3 | PI-Pfui intein middle domain |
| View | Download | 0.314 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.311 | N/A | N/A | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.310 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.309 | N/A | N/A | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.309 | N/A | N/A | a.112.1 | Description not found. |
| View | Download | 0.308 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.307 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.304 | N/A | N/A | a.4.7 | Ribosomal protein L11, C-terminal domain |
| View | Download | 0.301 | N/A | N/A | a.4.8 | Ribosomal protein S18 |
| View | Download | 0.301 | N/A | N/A | a.4.10 | N-terminal Zn binding domain of HIV integrase |
| View | Download | 0.298 | N/A | N/A | a.50.1 | Anaphylotoxins (complement system) |
| View | Download | 0.297 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.296 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.294 | N/A | N/A | a.153.1 | Nuclear receptor coactivator interlocking domain |
| View | Download | 0.294 | N/A | N/A | c.10.2 | L domain-like |
| View | Download | 0.292 | N/A | N/A | d.195.1 | YopH tyrosine phosphatase N-terminal domain |
| View | Download | 0.291 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.290 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.290 | N/A | N/A | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.286 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.284 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.283 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.278 | N/A | N/A | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.277 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.275 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.274 | N/A | N/A | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.272 | N/A | N/A | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.271 | N/A | N/A | a.65.1 | Annexin |
| View | Download | 0.268 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.266 | N/A | N/A | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.264 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.257 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.257 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.256 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.254 | N/A | N/A | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.254 | N/A | N/A | a.60.2 | RuvA domain 2-like |
| View | Download | 0.252 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.252 | N/A | N/A | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.251 | N/A | N/A | a.4.8 | Ribosomal protein S18 |
| View | Download | 0.251 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.249 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.247 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.246 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.243 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.242 | N/A | N/A | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.240 | N/A | N/A | c.9.1 | Barstar (barnase inhibitor) |
| View | Download | 0.239 | N/A | N/A | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.238 | N/A | N/A | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.235 | N/A | N/A | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.234 | N/A | N/A | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.233 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.233 | N/A | N/A | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.232 | N/A | N/A | a.17.1 | p8-MTCP1 |
| View | Download | 0.231 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.231 | N/A | N/A | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.230 | N/A | N/A | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.226 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.225 | N/A | N/A | a.156.1 | S13-like H2TH domain |
| View | Download | 0.223 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.223 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.223 | N/A | N/A | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.223 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.222 | N/A | N/A | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.222 | N/A | N/A | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.219 | N/A | N/A | a.144.1 | PABC (PABP) domain |
| View | Download | 0.218 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.217 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.214 | N/A | N/A | a.28.2 | Colicin E immunity proteins |
| View | Download | 0.214 | N/A | N/A | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.213 | N/A | N/A | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.212 | N/A | N/A | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.210 | N/A | N/A | a.30.1 | ROP protein |
| View | Download | 0.209 | N/A | N/A | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.209 | N/A | N/A | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.208 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.208 | N/A | N/A | a.20.1 | PGBD-like |
| View | Download | 0.207 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.205 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.204 | N/A | N/A | d.58.43 | Mechanosensitive channel protein MscS (YggB), C-terminal domain |
| View | Download | 0.204 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.203 | N/A | N/A | a.20.1 | PGBD-like |
| View | Download | 0.202 | N/A | N/A | a.140.1 | LEM domain |
