| Protein: | MRS1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 363 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRS1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..363] | [1..363] |
|
|
0.0 | [1..363] | [1..363] |
|
|
0.004 | [73..218] | [42..190] |
|
Region A: Residues: [1-69] |
1 11 21 31 41 51
| | | | | |
1 MSPKNITRSV IPAIDLYCRK ANFKTLKSLS MILGSKKEWY DTKKAPLRTF LVSRCGIFEQ 60
61 LRGRLVEDG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| nuclease activity | 2.26556994009539 | bayes_pls_golite062009 |
| 2.00836055708423 | bayes_pls_golite062009 | |
| ribonuclease activity | 1.78000986678433 | bayes_pls_golite062009 |
| exoribonuclease activity | 1.32264233824256 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 1.27522285482764 | bayes_pls_golite062009 |
| catalytic activity | 1.25233849524628 | bayes_pls_golite062009 |
| transcription regulator activity | 1.20586272399219 | bayes_pls_golite062009 |
| nucleic acid binding | 1.15524113948715 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 1.05288004668073 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 0.99953538134208 | bayes_pls_golite062009 |
| exonuclease activity | 0.967966366451269 | bayes_pls_golite062009 |
| DNA binding | 0.943022297191079 | bayes_pls_golite062009 |
| binding | 0.925646122805083 | bayes_pls_golite062009 |
| endoribonuclease activity, producing 5'-phosphomonoesters | 0.830848153280868 | bayes_pls_golite062009 |
| endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 0.681014317532767 | bayes_pls_golite062009 |
| endonuclease activity | 0.635517699603511 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 0.4571735090405 | bayes_pls_golite062009 |
| transcription factor activity | 0.350780284864953 | bayes_pls_golite062009 |
| RNA binding | 0.239100354404122 | bayes_pls_golite062009 |
| protein binding | 0.035326007863533 | bayes_pls_golite062009 |
| endoribonuclease activity | 0.016619833072142 | bayes_pls_golite062009 |
|
Region A: Residues: [70-218] |
1 11 21 31 41 51
| | | | | |
1 KVNLFSVFLT NDSFSFCKMT VDDKFNTSLV DWQKIPFDST FATDRRQNIS LLPVDTLFAT 60
61 EKIISILGVS PNMTNLVSIE RERSDLVDFN CKLQSNILEH LLYAKCQGVY VTSTNEKARL 120
121 LAAVCNPEFI DTFWCELTPI RVSLKENPS
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 1kcfA_ |
| Description: | Mitochondrial resolvase ydc2 N-terminal domain; Mitochondrial resolvase ydc2 catalytic domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [219-363] |
1 11 21 31 41 51
| | | | | |
1 ISVPREYQMY DPVVRATIKE VVTKRLLRSA FDNDIDPLMC LHLDKGWKLK FPILSSTTGL 60
61 NFSLKDCLSL DTGKDASDMT EVFLATMESS KVLRTYSNLV DIVMKDNGRL DSGVLKQFND 120
121 YVKQEKLNLQ HFQAGSSKFL KGAKI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
