| Protein: | POL5 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1022 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for POL5.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1022] | [1..1022] |
|
|
0.0 | [1..1010] | [1..928] |
|
|
0.0 | [7..859] | [36..836] |
|
|
0.0 | [7..859] | [34..835] |
|
|
0.0 | [44..859] | [1..766] |
|
|
0.0 | [7..690] | [124..893] |
|
|
3.0E-37 | [641..853] | [1..183] |
|
Region A: Residues: [1-694] |
1 11 21 31 41 51
| | | | | |
1 MTGKVNRDLF FKLASDLREE RLHAAVALIK DLSALDLPDD AEEWSYVLNR LIKGLSSDRN 60
61 SARLGFSLCL TEVINLAVNM PPGQRPKGLE STNEFLSTLS TILNVNVNEG TKKSMKGKDE 120
121 RGILFGKLFG LKSLLNEPLF SEIFVKDLEK GNTEFFIRFT EQLIDLALKK NWIKEPCFFT 180
181 LFQTMKMLLP FMDESSAEKI LLIYDKYDLT LTNEGLSTYL LLKYEGDESL IPSVLDLKNP 240
241 GWKDNDPLAR GNLPLLTKVL RNSSVIPDAN GGLKETKKQK NTNWNPRLHF VWSVLLPLFG 300
301 NGKLENTSHI SKKRKKTNNK KVQNSIQFPE FWKMAVDESF FNEKASSERK YLGFLIIDAA 360
361 FKAVPGSYIG FCFSQNVMRT LINQSIDSQR VLNKISQLTL DSIVKACEED SANRLVPCLN 420
421 AMLFGPHGSI NFDKLTKSGT VSKLIAIKEL PSTVLAQLLD VFFLQLQDKK GVLSHTLFAL 480
481 DSILHIVRAH KVEINDMDIM KPVLRPIVYM AFFKHTSDDL KLEQLHELAK ERLYSILGEL 540
541 TINKEIRCKD PEINSWQYLT LKLILDIENS HVGDLINPLD ENLENIKNEA ISCLSKVCRS 600
601 RTAQSWGLST LLSMCLVQLY AGDTDSISVI EELCEFSKHE NNSMVGITEI LLSLLAQKKA 660
661 LLRKLSLIIW QQFIEEVGLE ELQILLDILK AREN
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 3.4840129457355 | bayes_pls_golite062009 |
| nucleic acid binding | 2.27889073911459 | bayes_pls_golite062009 |
| transcription regulator activity | 2.19067997822967 | bayes_pls_golite062009 |
| actin binding | 1.7228099998642 | bayes_pls_golite062009 |
| DNA binding | 1.71679738414596 | bayes_pls_golite062009 |
| protein binding | 1.41127231900194 | bayes_pls_golite062009 |
| transcription factor activity | 1.01026749293758 | bayes_pls_golite062009 |
| transition metal ion binding | 0.301301625996911 | bayes_pls_golite062009 |
| structural molecule activity | 0.279533827088985 | bayes_pls_golite062009 |
| RNA binding | 0.243875756041061 | bayes_pls_golite062009 |
| transcription activator activity | 0.142253868848261 | bayes_pls_golite062009 |
| transcription factor binding | 8.79739237675814E-4 | bayes_pls_golite062009 |
|
Region A: Residues: [695-868] |
1 11 21 31 41 51
| | | | | |
1 KQGFAQLFEG EEEFEEIKEE NDASEDESKT GSESESESES DSDDADEKDE EDEANEDILN 60
61 IDKEATSALV KALNLPDNIV NDKGEVDLDQ LEGLSDDGGD DEDEESMDDE KMMELDDQLS 120
121 EIFKRRKEAL SSISTGNQRK FEVKQSRENV ISFKHRVVDM LAVYVKYCEK LTLA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [869-1022] |
1 11 21 31 41 51
| | | | | |
1 NKSEHSNNLG GSLSKLVYFI IPMLKCVNET LDRPLADKIS KLLKGKIFKI KVTAFKDMNK 60
61 DIELMDLLKK THKLMLTSKP GQHAAVFYSM CSTSSLFLSK LYVEIGGNDK LDELIDLYTA 120
121 TTKEWMQKGK CGPNIFIDFI NWLSSKKQTV MDKE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [866-1022] |
1 11 21 31 41 51
| | | | | |
1 TLANKSEHSN NLGGSLSKLV YFIIPMLKCV NETLDRPLAD KISKLLKGKI FKIKVTAFKD 60
61 MNKDIELMDL LKKTHKLMLT SKPGQHAAVF YSMCSTSSLF LSKLYVEIGG NDKLDELIDL 120
121 YTATTKEWMQ KGKCGPNIFI DFINWLSSKK QTVMDKE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
