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Protein Overview: DPO5_YEAST

General Information:
Name(s) found: DPO5_YEAST [Swiss-Prot]
Description(s) found:
Found 2 descriptions.
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  • DNA polymerase V OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=POL5 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 1022 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGKVNRDLF FKLASDLREE RLHAAVALIK DLSALDLPDD AEEWSYVLNR LIKGLSSDRN  60
   61 SARLGFSLCL TEVINLAVNM PPGQRPKGLE STNEFLSTLS TILNVNVNEG TKKSMKGKDE 120
  121 RGILFGKLFG LKSLLNEPLF SEIFVKDLEK GNTEFFIRFT EQLIDLALKK NWIKEPCFFT 180
  181 LFQTMKMLLP FMDESSAEKI LLIYDKYDLT LTNEGLSTYL LLKYEGDESL IPSVLDLKNP 240
  241 GWKDNDPLAR GNLPLLTKVL RNSSVIPDAN GGLKETKKQK NTNWNPRLHF VWSVLLPLFG 300
  301 NGKLENTSHI SKKRKKTNNK KVQNSIQFPE FWKMAVDESF FNEKASSERK YLGFLIIDAA 360
  361 FKAVPGSYIG FCFSQNVMRT LINQSIDSQR VLNKISQLTL DSIVKACEED SANRLVPCLN 420
  421 AMLFGPHGSI NFDKLTKSGT VSKLIAIKEL PSTVLAQLLD VFFLQLQDKK GVLSHTLFAL 480
  481 DSILHIVRAH KVEINDMDIM KPVLRPIVYM AFFKHTSDDL KLEQLHELAK ERLYSILGEL 540
  541 TINKEIRCKD PEINSWQYLT LKLILDIENS HVGDLINPLD ENLENIKNEA ISCLSKVCRS 600
  601 RTAQSWGLST LLSMCLVQLY AGDTDSISVI EELCEFSKHE NNSMVGITEI LLSLLAQKKA 660
  661 LLRKLSLIIW QQFIEEVGLE ELQILLDILK ARENKQGFAQ LFEGEEEFEE IKEENDASED 720
  721 ESKTGSESES ESESDSDDAD EKDEEDEANE DILNIDKEAT SALVKALNLP DNIVNDKGEV 780
  781 DLDQLEGLSD DGGDDEDEES MDDEKMMELD DQLSEIFKRR KEALSSISTG NQRKFEVKQS 840
  841 RENVISFKHR VVDMLAVYVK YCEKLTLANK SEHSNNLGGS LSKLVYFIIP MLKCVNETLD 900
  901 RPLADKISKL LKGKIFKIKV TAFKDMNKDI ELMDLLKKTH KLMLTSKPGQ HAAVFYSMCS 960
  961 TSSLFLSKLY VEIGGNDKLD ELIDLYTATT KEWMQKGKCG PNIFIDFINW LSSKKQTVMD1020
 1021 KE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..694] MSA 1.008835 View MSA. No confident structure predictions are available.
    2 View Details [695..868] MSA 5.016997 View MSA. No confident structure predictions are available.
    3 View Details [869..1022] deduced N/A No confident structure predictions are available.
    4 View Details [866..1022] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  3.4840129457355 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.27889073911459 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.19067997822967 bayes_pls_golite062009
  • actin binding
    		•  1.7228099998642 bayes_pls_golite062009
  • DNA binding
    		•  1.71679738414596 bayes_pls_golite062009
  • protein binding
    		•  1.41127231900194 bayes_pls_golite062009
  • transcription factor activity
    		•  1.01026749293758 bayes_pls_golite062009
  • transition metal ion binding
    		•  0.301301625996911 bayes_pls_golite062009
  • structural molecule activity
    		•  0.279533827088985 bayes_pls_golite062009
  • RNA binding
    		•  0.243875756041061 bayes_pls_golite062009
  • transcription activator activity
    		•  0.142253868848261 bayes_pls_golite062009
  • transcription factor binding
    		•  8.79739237675814E-4 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle