| Protein: | UBC13 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 153 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBC13.
| Description | E-value | Query Range |
Subject Range |
|
|
6.0E-60 | [4..149] | [2..147] |
|
|
9.0E-60 | [4..149] | [2..147] |
|
|
1.0E-59 | [4..149] | [2..147] |
|
|
1.0E-59 | [4..149] | [32..177] |
|
Region A: Residues: [1-153] |
1 11 21 31 41 51
| | | | | |
1 MASLPKRIIK ETEKLVSDPV PGITAEPHDD NLRYFQVTIE GPEQSPYEDG IFELELYLPD 60
61 DYPMEAPKVR FLTKIYHPNI DRLGRICLDV LKTNWSPALQ IRTVLLSIQA LLASPNPNDP 120
121 LANDVAEDWI KNEQGAKAKA REWTKLYAKK KPE
|
| Detection Method: |  |
| Confidence: | 839.529817 |
| Match: | 1jbbA_ |
| Description: | Ubiquitin conjugating enzyme, UBC |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 11.3486134076304 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 11.2964721480824 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 10.2401422444624 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 8.93602533934698 | bayes_pls_golite062009 |
| HLH domain binding | 8.10904818707269 | bayes_pls_golite062009 |
| ligase activity | 5.17219147802758 | bayes_pls_golite062009 |
| SUMO ligase activity | 3.88357560284404 | bayes_pls_golite062009 |
| ISG15 ligase activity | 3.37361650623694 | bayes_pls_golite062009 |
| transcription regulator activity | 2.21355731489173 | bayes_pls_golite062009 |
| nucleic acid binding | 2.13970605403492 | bayes_pls_golite062009 |
| DNA binding | 1.95596447916631 | bayes_pls_golite062009 |
| protein binding | 1.77678273247394 | bayes_pls_golite062009 |
| binding | 1.75350658654805 | bayes_pls_golite062009 |
| transcription repressor activity | 1.5236035191291 | bayes_pls_golite062009 |
| transcription activator activity | 1.19240180311941 | bayes_pls_golite062009 |
| catalytic activity | 0.891402822028799 | bayes_pls_golite062009 |
| NEDD8 ligase activity | 0.715654744941217 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.58835335751383 | bayes_pls_golite062009 |
| kinase activity | 0.519703305315987 | bayes_pls_golite062009 |
| protein kinase activity | 0.443948654247666 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.373779304908933 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.182854082413338 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.122859425935324 | bayes_pls_golite062009 |
| transferase activity | 0.0984525836903841 | bayes_pls_golite062009 |
| transcription factor binding | 0.0104967529560147 | bayes_pls_golite062009 |
