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View Structure Prediction Details

Protein: FAP7
Organism: Saccharomyces cerevisiae
Length: 197 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FAP7.

Description E-value Query
Range		 Subject
Range
FAP7 - Essential NTPase required for small ribosome subunit synthesis, mediates processing of the 20S pre-r...
KAD6_YEAST - Adenylate kinase isoenzyme 6 homolog FAP7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) G...
gi|190405164 - gi|190405164|gb|EDV08431.1| POS9-activating factor FAP7 [Saccharomyces cerevisiae RM11-1a]
gi|207347086 - gi|207347086|gb|EDZ73387.1| YDL166Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 3.0E-36 [1..187] [1..187]
gi|190691265, gi... - gi|190691265|gb|ACE87407.1| TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor...
gi|4929743, gi|5... - gi|7706212|ref|NP_057367.1| TAF9 RNA polymerase II, TATA box binding protein-associated factor isofo...
gi|109077513, gi... - gi|109077513|ref|XP_001093953.1| PREDICTED: TAF9 RNA polymerase II, TATA box binding protein (TBP)-a...
gi|114599906, gi... - gi|114599906|ref|XP_517726.2| PREDICTED: TAF9 RNA polymerase II isoform 5 [Pan troglodytes], gi|1145...
 4.0E-35 [8..177] [4..172]
gi|6457370 - gi|6457370|gb|AAF09498.1| unknown protein [Oryctolagus sp.]
KAD6_RABIT - Adenylate kinase isoenzyme 6 OS=Oryctolagus cuniculus GN=AK6 PE=2 SV=1
 6.0E-35 [6..177] [2..172]
KAD6_MOUSE - Adenylate kinase isoenzyme 6 OS=Mus musculus GN=Ak6 PE=1 SV=1
 7.0E-35 [6..177] [2..172]
CE28286 - ATP binding protein status:Confirmed UniProt:Q09527 protein_id:CAA87383.2
 3.0E-31 [3..175] [5..178]
KAD6_ARATH - Adenylate kinase isoenzyme 6 homolog OS=Arabidopsis thaliana GN=AAK6 PE=1 SV=1
 2.0E-28 [4..171] [10..176]

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Predicted Domain #1
Region A:
Residues: [1-197] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEARRYGPNI IVTGTPGCGK SSTCEFLKNK LKDYKYYNIS DFAKDNDCFE GYDEGRKSHI  60
   61 VDEDKLLDML EPLLRQGNSI VDWHVNDVFP ERLIDLVVVL RCDNSNLYSR LHARGYHDSK 120
  121 IEENLDAEIM GVVKQDAVES YEPHIVVELQ SDTKEDMVSN VSRIVAWEKM WLEQHPDGVT 180
  181 NEYQGPRSDD EDDEDSE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.0
Match: 2ak3A_
Description: Adenylate kinase; Microbial and mitochondrial ADK, insert "zinc finger" domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
general RNA polymerase II transcription factor activity 5.47805400577115 bayes_pls_golite062009
lysine N-acetyltransferase activity 5.46449952222453 bayes_pls_golite062009
histone acetyltransferase activity 5.46449952222453 bayes_pls_golite062009
N-acetyltransferase activity 4.25864282850521 bayes_pls_golite062009
N-acyltransferase activity 4.00838185080866 bayes_pls_golite062009
acetyltransferase activity 3.73766943057668 bayes_pls_golite062009
acyltransferase activity 3.24721386513202 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 3.21286388740986 bayes_pls_golite062009
transferase activity, transferring acyl groups 3.04795936672801 bayes_pls_golite062009
binding 2.64537357529343 bayes_pls_golite062009
nucleic acid binding 2.09956015274464 bayes_pls_golite062009
transcription regulator activity 2.09345198747025 bayes_pls_golite062009
DNA binding 1.87765278833074 bayes_pls_golite062009
RNA helicase activity 1.42791449104435 bayes_pls_golite062009
RNA-dependent ATPase activity 1.39335733374328 bayes_pls_golite062009
ATP-dependent RNA helicase activity 1.36724390116598 bayes_pls_golite062009
purine ribonucleotide binding 1.2935968641033 bayes_pls_golite062009
ribonucleotide binding 1.2935353851804 bayes_pls_golite062009
purine nucleotide binding 1.29138695385133 bayes_pls_golite062009
nucleotide binding 1.28669586915546 bayes_pls_golite062009
protein binding 1.22129154759482 bayes_pls_golite062009
transcription elongation regulator activity 1.11383295816593 bayes_pls_golite062009
catalytic activity 1.00104173493322 bayes_pls_golite062009
ATP binding 0.98146619596929 bayes_pls_golite062009
adenyl ribonucleotide binding 0.949788783884952 bayes_pls_golite062009
adenyl nucleotide binding 0.931486373329219 bayes_pls_golite062009
kinase activity 0.691112783105676 bayes_pls_golite062009
transcription factor activity 0.682439846757997 bayes_pls_golite062009
motor activity 0.677658554107 bayes_pls_golite062009
helicase activity 0.6191010101321 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.499834566483656 bayes_pls_golite062009
0.442119153778711 bayes_pls_golite062009
purine NTP-dependent helicase activity 0.29664013896754 bayes_pls_golite062009
ATP-dependent helicase activity 0.29664013896754 bayes_pls_golite062009
RNA polymerase II transcription factor activity 0.243902356228423 bayes_pls_golite062009
nucleotidyltransferase activity 0.181509771587324 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.147579541298736 bayes_pls_golite062009
pyrophosphatase activity 0.133017653323467 bayes_pls_golite062009
microtubule motor activity 0.11674780318211 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.113504049290503 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.111293884322157 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.0430764033739892 bayes_pls_golite062009
protein kinase activity 0.0364322017534667 bayes_pls_golite062009
RNA binding 0.0261282189186349 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle