| Protein: | DNM1 |
| Organism: | Homo sapiens |
| Length: | 864 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DNM1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..860] | [1..856] |
|
|
0.0 | [1..850] | [1..850] |
|
|
0.0 | [1..856] | [1..856] |
|
Region A: Residues: [1-318] |
1 11 21 31 41 51
| | | | | |
1 MGNRGMEDLI PLVNRLQDAF SAIGQNADLD LPQIAVVGGQ SAGKSSVLEN FVGRDFLPRG 60
61 SGIVTRRPLV LQLVNATTEY AEFLHCKGKK FTDFEEVRLE IEAETDRVTG TNKGISPVPI 120
121 NLRVYSPHVL NLTLVDLPGM TKVPVGDQPP DIEFQIRDML MQFVTKENCL ILAVSPANSD 180
181 LANSDALKVA KEVDPQGQRT IGVITKLDLM DEGTDARDVL ENKLLPLRRG YIGVVNRSQK 240
241 DIDGKKDITA ALAAERKFFL SHPSYRHLAD RMGTPYLQKV LNQQLTNHIR DTLPGLRNKL 300
301 QSQLLSIEKE VEEYKNFR
|
| Detection Method: |  |
| Confidence: | 136.0 |
| Match: | 2akaB |
| Description: | Structure of the nucleotide-free myosin II motor domain from Dictyostelium discoideum fused to the GTPase domain of dynamin 1 from Rattus norvegicus |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [319-512] |
1 11 21 31 41 51
| | | | | |
1 PDDPARKTKA LLQMVQQFAV DFEKRIEGSG DQIDTYELSG GARINRIFHE RFPFELVKME 60
61 FDEKELRREI SYAIKNIHGI RTGLFTPDMA FETIVKKQVK KIREPCLKCV DMVISELIST 120
121 VRQCTKKLQQ YPRLREEMER IVTTHIRERE GRTKEQVMLL IDIELAYMNT NHEDFIGFAN 180
181 AQQRSNQMNK KKTS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [513-631] |
1 11 21 31 41 51
| | | | | |
1 GNQDEILVIR KGWLTINNIG IMKGGSKEYW FVLTAENLSW YKDDEEKEKK YMLSVDNLKL 60
61 RDVEKGFMSS KHIFALFNTE QRNVYKDYRQ LELACETQEE VDSWKASFLR AGVYPERVG
|
| Detection Method: | |
| Confidence: | 30.39794 |
| Match: | 2dynA |
| Description: | Dynamin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 3.72754591832642 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.48744511411671 | bayes_pls_golite062009 |
| binding | 3.29080729281876 | bayes_pls_golite062009 |
| protein binding | 3.17213698546013 | bayes_pls_golite062009 |
| transcription regulator activity | 2.10584700564436 | bayes_pls_golite062009 |
| actin filament binding | 2.03444575838575 | bayes_pls_golite062009 |
| DNA binding | 1.77960272183811 | bayes_pls_golite062009 |
| glutamate receptor binding | 1.76346239890943 | bayes_pls_golite062009 |
| molecular transducer activity | 1.55319485371003 | bayes_pls_golite062009 |
| signal transducer activity | 1.55319485371003 | bayes_pls_golite062009 |
| nucleic acid binding | 1.55295906221034 | bayes_pls_golite062009 |
| clathrin binding | 1.29927347270153 | bayes_pls_golite062009 |
| transporter activity | 1.28986800087234 | bayes_pls_golite062009 |
| phospholipid binding | 1.09683218092034 | bayes_pls_golite062009 |
| receptor binding | 1.00859318603128 | bayes_pls_golite062009 |
| protein domain specific binding | 0.90578029954417 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.79883446648737 | bayes_pls_golite062009 |
| phosphoinositide binding | 0.71817045430443 | bayes_pls_golite062009 |
| profilin binding | 0.66906205737225 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.35466574267734 | bayes_pls_golite062009 |
| receptor activity | 0.353510125274044 | bayes_pls_golite062009 |
| beta-amyloid binding | 0.34714857141225 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.207829786337892 | bayes_pls_golite062009 |
| structural molecule activity | 0.160152014803717 | bayes_pls_golite062009 |
| protein complex binding | 0.15504114076075 | bayes_pls_golite062009 |
| alpha-catenin binding | 0.102004310679969 | bayes_pls_golite062009 |
| receptor signaling protein activity | 0.10105990547756 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.0611639610381174 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.0524559849408587 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.0498422520006935 | bayes_pls_golite062009 |
|
Region A: Residues: [632-744] |
1 11 21 31 41 51
| | | | | |
1 DKEKASETEE NGSDSFMHSM DPQLERQVET IRNLVDSYMA IVNKTVRDLM PKTIMHLMIN 60
61 NTKEFIFSEL LANLYSCGDQ NTLMEESAEQ AQRRDEMLRM YHALKEALSI IGD
|
| Detection Method: | |
| Confidence: | 28.769551 |
| Match: | PF02212.9 |
| Description: | No description for PF02212.9 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.953 | 0.002 | GTPase activity | a.7.4 | Smac/diablo |
|
Region A: Residues: [745-864] |
1 11 21 31 41 51
| | | | | |
1 INTTTVSTPM PPPVDDSWLQ VQSVPAGRRS PTSSPTPQRR APAVPPARPG SRGPAPGPPP 60
61 AGSALGGAPP VPSRPGASPD PFGPPPQVPS RPNRAPPGVP SRSGQASPSR PESPRPPFDL 120
121
|
| Detection Method: | |
| Confidence: | 3.522879 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
