| Protein: | Zasp52-PC |
| Organism: | Drosophila melanogaster |
| Length: | 1082 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Zasp52-PC.
| Description | E-value | Query Range |
Subject Range |
|
|
597.0 | [0..99] | [1079..328] |
|
Region A: Residues: [1-93] |
1 11 21 31 41 51
| | | | | |
1 MAQPQLLQIK LSRFDAQPWG FRLQGGTDFA QPLLVQKVNA GSLSEQAGLQ PGDAVVKIND 60
61 VDVFNLRHKD AQDIVVRSGN NFVITVQRGG STW
|
| Detection Method: |  |
| Confidence: | 20.522879 |
| Match: | 1v5lA |
| Description: | Solution structure of PDZ domain of mouse Alpha-actinin-2 associated LIM protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of muscle | 3.94885944537237 | bayes_pls_golite062009 |
| actin binding | 3.71885072001885 | bayes_pls_golite062009 |
| actinin binding | 3.61513078757793 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.60106431937699 | bayes_pls_golite062009 |
| binding | 3.2595117613307 | bayes_pls_golite062009 |
| protein binding | 2.35875654816667 | bayes_pls_golite062009 |
| transcription regulator activity | 2.16834620509051 | bayes_pls_golite062009 |
| actin filament binding | 1.91421788587359 | bayes_pls_golite062009 |
| myosin binding | 1.34447751574529 | bayes_pls_golite062009 |
| alpha-actinin binding | 0.81785989473612 | bayes_pls_golite062009 |
| transporter activity | 0.782216866213126 | bayes_pls_golite062009 |
| structural molecule activity | 0.745651480925433 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.699604120098573 | bayes_pls_golite062009 |
| PDZ domain binding | 0.53069705861477 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.434921764966531 | bayes_pls_golite062009 |
| protein domain specific binding | 0.30840185305841 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.250590541549843 | bayes_pls_golite062009 |
| molecular transducer activity | 0.211809989510755 | bayes_pls_golite062009 |
| signal transducer activity | 0.211809989510755 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.182094987832726 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.171693460058476 | bayes_pls_golite062009 |
| transcription activator activity | 0.0433431329070377 | bayes_pls_golite062009 |
| transcription factor binding | 0.0283953080227368 | bayes_pls_golite062009 |
| receptor binding | 0.00333430733556384 | bayes_pls_golite062009 |
|
Region A: Residues: [94-216] |
1 11 21 31 41 51
| | | | | |
1 RPHVTPTGNV PQPNSPYLQT VTKTSLAHKQ QDSQHIGCGY NNAARPFSNG GDGGVKSIVN 60
61 KQYNTPVGIY SDESIAETLS AQAEVLAGGV LGVNFKKNEK EYQGDRSEVL KFLREEETGQ 120
121 STP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [217-520] |
1 11 21 31 41 51
| | | | | |
1 AFGNSHYEHD APQQLQQPQQ QYNQHQQHYH QQQQQQQSST TRHVSAPVNS PKPPSTGGLP 60
61 TGQNICTECE RLITGVFVRI KDKNLHVECF KCATCGTSLK NQGYYNFNNK LYCDIHAKQA 120
121 AINNPPTGTE GYVPVPIKPN TKLSASTISS ALNSHGYGGH SNGYSNGNST PAPAPPESES 180
181 SQELPLPPPP SPTQLLQYEA EQQVLPEPHM STIQQPQQQQ KLEHTRTHSS LSSISSGSSS 240
241 SGVGGSGSGS GSGSGVGQSQ QSYSSTLSLD RFGSPLHSRQ TSGSSTSLEV ALAAPGAGQG 300
301 DNYT
|
| Detection Method: | |
| Confidence: | 3.76 |
| Match: | 2dfyX |
| Description: | No description for 2dfyX was found. |
|
Region A: Residues: [521-664] |
1 11 21 31 41 51
| | | | | |
1 MTPPSPPPPP PPQAQSVTNY RLQAAQNEND MNTQNKSPNA YNQLLKEYSN KLQQQHHHNT 60
61 TQHTTATTAP SLKHNNTAKP FAVAATSTPQ QHLPHQQHQQ QPLVAALTAT LANQLKFNPH 120
121 QVASSQATAT VATVAPSAAT AATA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [665-808] |
1 11 21 31 41 51
| | | | | |
1 AATPQAATAT DSPAATASSS DNMSAYVADE PSSIYGQISA ESVALAPPPP QPPTAGGGDQ 60
61 PFEYVTLTGN VIRSVQAPGK GACPSYKVNQ GYARPFGAAA PKSPVSYPPQ QQQQSPRPAP 120
121 GGQNPYATLP RSNVGQQGRN VRYQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [809-900] |
1 11 21 31 41 51
| | | | | |
1 QQQQQQQQYN NQQKQQYRNS YPMGSNYSTP SQSPYITSNT NNYSSSNSYN NNNYSNYNNN 60
61 NVYRGAGGKS AGAFGATSAP KRGRGILNKA AG
|
| Detection Method: | |
| Confidence: | 6.0 |
| Match: | 1tf6A |
| Description: | Transcription factor IIIA, TFIIIA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.70988788192472 | bayes_pls_golite062009 |
| DNA binding | 4.56219307357342 | bayes_pls_golite062009 |
| nucleic acid binding | 4.28215395396923 | bayes_pls_golite062009 |
| transcription factor activity | 3.50954949535763 | bayes_pls_golite062009 |
| binding | 3.10743787485868 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.31369346002275 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.22104591928521 | bayes_pls_golite062009 |
| transcription activator activity | 2.19952417915035 | bayes_pls_golite062009 |
| transcription repressor activity | 1.64349785387632 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.42975942698743 | bayes_pls_golite062009 |
| transcription factor binding | 1.39608963544799 | bayes_pls_golite062009 |
| chromatin binding | 1.37132088004982 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.0497955246512 | bayes_pls_golite062009 |
| protein binding | 1.00484935878505 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.912796194488319 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.77874411480713 | bayes_pls_golite062009 |
| tubulin binding | 0.744315484113484 | bayes_pls_golite062009 |
| microtubule binding | 0.576452165256057 | bayes_pls_golite062009 |
| signal transducer activity | 0.274401804698955 | bayes_pls_golite062009 |
| molecular transducer activity | 0.274401804698955 | bayes_pls_golite062009 |
| catalytic activity | 0.245893663605433 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.240825841910931 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.10558148421807 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.0129353639725593 | bayes_pls_golite062009 |
|
Region A: Residues: [901-1082] |
1 11 21 31 41 51
| | | | | |
1 PGVRIPLCNS CNVQIRGPFI TALGRIWCPD HFICVNGNCR RPLQDIGFVE EKGDLYCEYC 60
61 FEKYLAPTCS KCAGKIKGDC LNAIGKHFHP ECFTCGQCGK IFGNRPFFLE DGNAYCEADW 120
121 NELFTTKCFA CGFPVEAGDR WVEALNHNYH SQCFNCTFCK QNLEGQSFYN KGGRPFCKNH 180
181 AR
|
| Detection Method: | |
| Confidence: | 34.221849 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
