| Protein: | gi|56966015, gi|... |
| Organism: | Escherichia coli |
| Length: | 276 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|56966015, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
318.0 | [0..4] | [276..1] |
|
|
269.0 | [0..4] | [276..1] |
|
|
267.0 | [0..4] | [276..1] |
|
|
267.0 | [0..4] | [276..1] |
|
|
260.0 | [0..4] | [276..1] |
|
|
257.0 | [0..4] | [248..1] |
|
|
250.0 | [0..4] | [257..1] |
|
|
250.0 | [0..4] | [273..1] |
|
|
249.0 | [0..4] | [275..1] |
|
Region A: Residues: [1-276] |
1 11 21 31 41 51
| | | | | |
1 GSAMAKANSS FSEVQIARRI KEGRGQGHGK DYIPWLTVQE VPSSGRSHRI YSHKTGRVHH 60
61 LLSDLELAVF LSLEWESSVL DIREQFPLLP SDTRQIAIDS GIKHPVIRGV DQVMSTDFLV 120
121 DCKDGPFEQF AIQVKPAAAL QDERTLEKLE LERRYWQQKQ IPWFIFTDKE INPVVKENIE 180
181 WLYSVKTEEV SAELLAQLSP LAHILQEKGD ENIINVCKQV DIAYDLELGK TLSEIRALTA 240
241 NGFIKFNIYK SFRANKCADL CISQVVNMEE LRYVAN
|
| Detection Method: |  |
| Confidence: | 89.154902 |
| Match: | 1t0fA |
| Description: | Crystal Structure of the TnsA/TnsC(504-555) complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transposase activity | 5.85386541527308 | bayes_pls_golite062009 |
| structure-specific DNA binding | 3.52550844883954 | bayes_pls_golite062009 |
| single-stranded DNA binding | 3.46092137748785 | bayes_pls_golite062009 |
| endodeoxyribonuclease activity | 3.0991947840905 | bayes_pls_golite062009 |
| transcription regulator activity | 3.01009518141427 | bayes_pls_golite062009 |
| deoxyribonuclease activity | 2.87729080403218 | bayes_pls_golite062009 |
| single-stranded DNA specific endodeoxyribonuclease activity | 2.31907631615518 | bayes_pls_golite062009 |
| transcription factor activity | 2.19132959032624 | bayes_pls_golite062009 |
| nuclease activity | 1.25814640084356 | bayes_pls_golite062009 |
| endonuclease activity | 1.24642331865775 | bayes_pls_golite062009 |
| binding | 1.15106991667759 | bayes_pls_golite062009 |
| damaged DNA binding | 1.13029144747469 | bayes_pls_golite062009 |
| DNA binding | 1.05025565428795 | bayes_pls_golite062009 |
| nucleic acid binding | 1.00486797573596 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.93961699880918 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.878597940882332 | bayes_pls_golite062009 |
| catalytic activity | 0.816447099398022 | bayes_pls_golite062009 |
| hydrolase activity | 0.813010242398432 | bayes_pls_golite062009 |
| transcription activator activity | 0.73287613732806 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.697234220778482 | bayes_pls_golite062009 |
| DNA strand annealing activity | 0.66439287326234 | bayes_pls_golite062009 |
| transcription repressor activity | 0.613365549270509 | bayes_pls_golite062009 |
| DNA helicase activity | 0.120530519654142 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.0793740780332699 | bayes_pls_golite062009 |
| protein binding | 0.014476536759339 | bayes_pls_golite062009 |
