| Protein: | cul-5 |
| Organism: | Caenorhabditis elegans |
| Length: | 765 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cul-5.
| Description | E-value | Query Range |
Subject Range |
|
|
710.0 | [0..1] | [765..221] |
|
Region A: Residues: [1-765] |
1 11 21 31 41 51
| | | | | |
1 MQFDEEWSKA DPIVHALLHQ KSVTPAAWQD LFYHVYKITS WVDDGPLKIR DILTRCINDY 60
61 VHEANKRIRS LQTDGSLLIG YIKEWNRFYQ QANILPLPFK KIDESSRRRS VPETPEESIR 120
121 TVMLEKWNEI IFMNISEQLL VEALRLVKEE RDGNIIDAQN VIGIRESFVA LNDRAGEDPL 180
181 LVYRQSFERQ FIEQTTEYYK KICGNLLNEL GVLEYMVYAD KKLEEEQQRA KRYLEMNSPT 240
241 SGKHMEKAVI ALVESFEDTI LAECSKLIAS KDVERLQRLY RLIRRTRSGI DTVLKCIDTH 300
301 IRTEGLNDMR NNAENLSTDP ERYVQQLLLM FDKFSSLVRE GFCDDARLLT ARDKAFRAVV 360
361 NDSSIFKTEM MNKKGRTLSV ESKCAELLAN YCDLLLRKTQ LSKKLTSEEI DEKLNQVLLV 420
421 LKYVENKDVF MRFHRAHLSR RLILEMSADQ EKEEMMVTKL RECGMPSDAV NKLSRMLQDI 480
481 ELNKDMNSSF KKALTGTNNN KSIADSINMK VLNGGAWGRG GSERIRFSLP RELEDFVPEM 540
541 EAFYKKQHNG RKLCWMHHWS SGTMVFGTAN GGRFDLECTT FQMAVLFCFN DRAHDKISLE 600
601 TLRLATELPD AELNRTLLSL VAYPKMRYQI LLCDVPSTTV TARDFTDSTK FLINHDFNVV 660
661 KNGKSQQRGK VNLIGRLQLS LEANAEKEHE SIVALRELRV QEGIVKILKT RKTYTLAQLT 720
721 MELVEILKPL FIPNRKIIKE QIDWLIENKY MERRADDINT FVYIS
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 1u6gA |
| Description: | Crystal Structure of The Cand1-Cul1-Roc1 Complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 9.47178230940453 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 9.15192834197166 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 8.12051073361876 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 6.87003086224111 | bayes_pls_golite062009 |
| vasopressin activated calcium mobilizing receptor activity | 6.55844152294696 | bayes_pls_golite062009 |
| transcription regulator activity | 5.55329976718261 | bayes_pls_golite062009 |
| transcription factor activity | 4.33152142980289 | bayes_pls_golite062009 |
| transcription repressor activity | 3.85678231380989 | bayes_pls_golite062009 |
| ligase activity | 3.66453881539688 | bayes_pls_golite062009 |
| transcription activator activity | 2.37668609508629 | bayes_pls_golite062009 |
| binding | 2.3219000606044 | bayes_pls_golite062009 |
| nucleic acid binding | 2.21939548334548 | bayes_pls_golite062009 |
| protein binding | 2.20237620151495 | bayes_pls_golite062009 |
| DNA binding | 2.06132216820898 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.70025468248325 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.33374581364046 | bayes_pls_golite062009 |
| specific transcriptional repressor activity | 0.96257232341735 | bayes_pls_golite062009 |
| transporter activity | 0.891050405674973 | bayes_pls_golite062009 |
| transcription factor binding | 0.85714789329232 | bayes_pls_golite062009 |
| DNA replication origin binding | 0.71823621709622 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.697234220778482 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.648150681919233 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.368917395770011 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.322180400748724 | bayes_pls_golite062009 |
| DNA helicase activity | 0.300899564141452 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.286130392009263 | bayes_pls_golite062009 |
| structural molecule activity | 0.272316540117209 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.257777071965243 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.249771970501337 | bayes_pls_golite062009 |
| catalytic activity | 0.201606344181603 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.175575779922515 | bayes_pls_golite062009 |
| hydrolase activity | 0.140191206949582 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.107671044044222 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.0912115683429473 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.0856082199488197 | bayes_pls_golite062009 |
| transferase activity | 0.064832527337659 | bayes_pls_golite062009 |
