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View Structure Prediction Details

Protein: gi|22128000, gi|...
Organism: Yersinia pestis KIM10+
Length: 609 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22128000, gi|....

Description E-value Query
Range
Subject
Range
gi|83571319, gi|... - gi|83571319|ref|ZP_00922759.1| COG0449: Glucosamine 6-phosphate synthetase, contains amidotransferas...
0.0 [1..609] [1..609]
gi|73857722, gi|... - gi|74314245|ref|YP_312664.1| D-fructose-6-phosphate amidotransferase [Shigella sonnei Ss046], gi|738...
0.0 [1..609] [1..609]
gi|187733589, gi... - gi|75177701|ref|ZP_00697766.1| COG0449: Glucosamine 6-phosphate synthetase, contains amidotransferas...
0.0 [1..609] [1..609]
gi|115515126, gi... - gi|117626002|ref|YP_859325.1| D-fructose-6-phosphate amidotransferase [Escherichia coli APEC O1], gi...
0.0 [1..609] [1..609]
gi|82779079, gi|... - gi|82779079|ref|YP_405428.1| D-fructose-6-phosphate amidotransferase [Shigella dysenteriae Sd197], g...
0.0 [1..609] [1..609]
gi|170681402, gi... - gi|170681402|ref|YP_001746059.1| glutamine-fructose-6-phosphate transaminase (isomerizing) [Escheric...
gi|218372565, gi... - gi|218702579|ref|YP_002410208.1| glucosamine--fructose-6-phosphate aminotransferase [Escherichia col...
gi|215267139, gi... - gi|215489067|ref|YP_002331498.1| glucosamine--fructose-6-phosphate aminotransferase [Escherichia col...
gi|226902794, gi... - gi|237703530|ref|ZP_04534011.1| L-glutamine:D-fructose-6-phosphate aminotransferase [Escherichia sp....
gi|218707375, gi... - gi|218707375|ref|YP_002414894.1| glucosamine--fructose-6-phosphate aminotransferase [Escherichia col...
GLMS_SHIFL - Glutamine--fructose-6-phosphate aminotransferase [isomerizing] OS=Shigella flexneri GN=glmS PE=3 SV=...
gi|110617101, gi... - gi|110807553|ref|YP_691073.1| D-fructose-6-phosphate amidotransferase [Shigella flexneri 5 str. 8401...
gi|24054291, gi|... - gi|24115032|ref|NP_709542.1| D-fructose-6-phosphate amidotransferase [Shigella flexneri 2a str. 301]...
gi|188489293, gi... - gi|75514205|ref|ZP_00736513.1| COG0449: Glucosamine 6-phosphate synthetase, contains amidotransferas...
gi|30043227, gi|... - gi|30064966|ref|NP_839137.1| D-fructose-6-phosphate amidotransferase [Shigella flexneri 2a str. 2457...
gi|91213253, gi|... - gi|91213253|ref|YP_543239.1| D-fructose-6-phosphate amidotransferase [Escherichia coli UTI89], gi|91...
0.0 [1..609] [1..609]
gi|190909109, gi... - gi|75242483|ref|ZP_00726227.1| COG0449: Glucosamine 6-phosphate synthetase, contains amidotransferas...
gi|110345662, gi... - gi|110644070|ref|YP_671800.1| glucosamine--fructose-6-phosphate aminotransferase [Escherichia coli 5...
0.0 [1..609] [1..609]
gi|83588406, gi|... - gi|83588406|ref|ZP_00927030.1| COG0449: Glucosamine 6-phosphate synthetase, contains amidotransferas...
gi|157080617, gi... - gi|75188487|ref|ZP_00701754.1| COG0449: Glucosamine 6-phosphate synthetase, contains amidotransferas...
gi|157068890, gi... - gi|75197625|ref|ZP_00707695.1| COG0449: Glucosamine 6-phosphate synthetase, contains amidotransferas...
gi|75210661, gi|... - gi|75210661|ref|ZP_00710802.1| COG0449: Glucosamine 6-phosphate synthetase, contains amidotransferas...
EG10382 - L-glutamine:D-fructose-6-phosphate aminotransferase / Glucosamine-6-phosphate synthase; glucosamine-...
gi|191165793, gi... - gi|75230998|ref|ZP_00717433.1| COG0449: Glucosamine 6-phosphate synthetase, contains amidotransferas...
gi|192957549, gi... - gi|75236461|ref|ZP_00720557.1| COG0449: Glucosamine 6-phosphate synthetase, contains amidotransferas...
gi|193063823, gi... - gi|75258268|ref|ZP_00729716.1| COG0449: Glucosamine 6-phosphate synthetase, contains amidotransferas...
GLMS_ECOLI - Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) (Hexosephosphate amin...
gi|85676309, gi|... - gi|89110278|ref|AP_004058.1| L-glutamine:D-fructose-6-phosphate aminotransferase [Escherichia coli s...
gi|169757162, gi... - gi|170022234|ref|YP_001727188.1| glucosamine--fructose-6-phosphate aminotransferase [Escherichia col...
gi|209921210, gi... - gi|209921210|ref|YP_002295294.1| glucosamine--fructose-6-phosphate aminotransferase [Escherichia col...
gi|238861652, gi... - gi|238902820|ref|YP_002928616.1| L-glutamine:D-fructose-6-phosphate aminotransferase [Escherichia co...
gi|218354187, gi... - gi|218697455|ref|YP_002405122.1| glucosamine--fructose-6-phosphate aminotransferase [Escherichia col...
gi|242379267, gi... - gi|251786994|ref|YP_003001298.1| hypothetical protein B21_03557 [Escherichia coli BL21], gi|24237926...
gi|254290431, gi... - gi|254290431|ref|YP_003056179.1| D-fructose-6-phosphate amidotransferase [Escherichia coli BL21(DE3)...
gi|226838913, gi... - gi|254038948|ref|ZP_04873000.1| glutamine-fructose-6-phosphate transaminase [Escherichia sp. 1_1_43]...
gi|254163681, gi... - gi|254163681|ref|YP_003046789.1| D-fructose-6-phosphate amidotransferase [Escherichia coli B str. RE...
EG10382 - L-glutamine:D-fructose-6-phosphate aminotransferase / Glucosamine-6-phosphate synthase; glucosamine-...
gi|124530057, gi... - gi|124530057|ref|ZP_01700840.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing [Esc...
0.0 [1..609] [1..609]
gi|73671334|gb|A... - GlmS variant [Escherichia coli]
gi|73671334 - gi|73671334|gb|AAZ80078.1| GlmS variant [Escherichia coli]
0.0 [1..609] [1..609]
gi|82546110, gi|... - gi|82546110|ref|YP_410057.1| D-fructose-6-phosphate amidotransferase [Shigella boydii Sb227], gi|812...
0.0 [1..609] [1..609]

Back

Predicted Domain #1
Region A:
Residues: [1-609]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGIVGAVAQ RDIAEILIEG LRRLEYRGYD SAGLAVVDSE GHLTRLRRVG KVHALSDAAE  60
   61 KQDLHGGTGI AHTRWATHGE PSEANAHPHV SDYISVVHNG IIENHEPLRE LLISRGYRFS 120
  121 SETDTEVIAH LVHWEQQQGG SLLEVVKRVI PQLRGAYGTV VMDSRDPSRL IAARSGSPLV 180
  181 IGCGVGENFI ASDQLALLPV TRRFIFLEEG DVVEVTRRSI SIFDKQGNAI ERPEIESQVQ 240
  241 YDAGDKGIYR HYMQKEIYEQ PMAIKNTLEG RLSHGMIDLS ELGPKADALL AEVQHIQIIA 300
  301 CGTSYNSGMV SRYWFESLAG VPCDVEIASE FRYRKSAVRP NSLLITLSQS GETADTLAAL 360
  361 RLSKELGYLG SLAICNVAGS SLVRESDLAL MTKAGTEIGV ASTKAFTTQL TVLLMLVGRI 420
  421 GKLKGADASL EHDIVHALQA LPARIEQMLS LDKTIEALAE GFSDKHHALF LGRGDQYPIA 480
  481 MEGALKLKEI SYIHAEAYAA GELKHGPLAL IDADMPVIVV APNNELLEKL KSNIEEVRAR 540
  541 GGLLYVFADQ DAGFTDSEGM KIIQLPHVEE IIAPIFYTVP LQLLSYHVAL IKGTDVDQPR 600
  601 NLAKSVTVE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 167.0
Match: 1jxaA
Description: "Isomerase domain" of glucosamine 6-phosphate synthase (GLMS); Glucosamine 6-phosphate synthase, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
glutamine-fructose-6-phosphate transaminase (isomerizing) activity 4.12465195642555 bayes_pls_golite062009
glucose-6-phosphate isomerase activity 2.74527495029339 bayes_pls_golite062009
D-sedoheptulose 7-phosphate isomerase activity 2.03357282678145 bayes_pls_golite062009
intramolecular oxidoreductase activity 1.99606027864666 bayes_pls_golite062009
catalytic activity 1.5278037255884 bayes_pls_golite062009
intramolecular oxidoreductase activity, interconverting aldoses and ketoses 1.49939040101274 bayes_pls_golite062009
sugar binding 1.40175307923331 bayes_pls_golite062009
peptidase activity 1.34295853726897 bayes_pls_golite062009
transferase activity 1.20219571915061 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 1.16226272745141 bayes_pls_golite062009
isomerase activity 0.875614547872629 bayes_pls_golite062009
binding 0.8320110584046 bayes_pls_golite062009
nucleic acid binding 0.798789250029517 bayes_pls_golite062009
endopeptidase activity 0.759765292911898 bayes_pls_golite062009
transferase activity, transferring nitrogenous groups 0.329741341879618 bayes_pls_golite062009
transaminase activity 0.307877519336205 bayes_pls_golite062009
protein binding 0.152745336606766 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle