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View Structure Prediction Details

Protein: YURM_BACSU
Organism: Bacillus subtilis subsp. subtilis str. 168
Length: 300 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YURM_BACSU.

Description E-value Query
Range		 Subject
Range
gi|56908333, gi|... - gi|56962098|ref|YP_173821.1| sugar ABC transporter permease [Bacillus clausii KSM-K16], gi|56908333|...
 194.0 [0..9] [300..18]

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Predicted Domain #1
Region A:
Residues: [1-300] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPQKKTDSF RLEPVPDQHI EVKDKPRRKW YIGETSVWVF LFLYLIAIAY PLLWMVMSAF  60
   61 KNSDDIFEHS WSLPSSWHPE NFVSAWNQGI SSYFMNSVIV TALTCVITVF ISAWAAYGLS 120
  121 RFEFKGKGFF LVLCLGGLML TPQVSLVPLY SIIQSLGLYN TYWALILPYA AYRIPFTIIL 180
  181 IRSYFLSISK ELEEAAYLDG CTSFGVFFRI FLPMSVPILV TSGILTAYHT WNEFMFAIIF 240
  241 IDDENLRTIP AGLMQFRDAL QTDWGVLLAG LTISAAPIII LFLLMQKYFV RGIASGSVKG 300
  301

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.0
Match: 2onkC
Description: No description for 2onkC was found.

Predicted functions:

Term Confidence Notes
maltose transmembrane transporter activity 5.56493732164373 bayes_pls_golite062009
disaccharide transmembrane transporter activity 5.56493732164373 bayes_pls_golite062009
alpha-glucoside transmembrane transporter activity 5.56493732164373 bayes_pls_golite062009
oligosaccharide transmembrane transporter activity 5.49228003416805 bayes_pls_golite062009
oligosaccharide-transporting ATPase activity 5.49228003416805 bayes_pls_golite062009
maltose-transporting ATPase activity 5.49228003416805 bayes_pls_golite062009
glycerol transmembrane transporter activity 5.18950109645555 bayes_pls_golite062009
polyol transmembrane transporter activity 4.82807078807389 bayes_pls_golite062009
alcohol transmembrane transporter activity 4.82807078807389 bayes_pls_golite062009
glucoside transmembrane transporter activity 4.82719120269752 bayes_pls_golite062009
glycerol-3-phosphate transmembrane transporter activity 4.63318176881689 bayes_pls_golite062009
transporter activity 4.47791794099048 bayes_pls_golite062009
transmembrane transporter activity 4.39634414867723 bayes_pls_golite062009
primary active transmembrane transporter activity 4.00217276617164 bayes_pls_golite062009
P-P-bond-hydrolysis-driven transmembrane transporter activity 3.99891866007599 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances 3.98211391811154 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of substances 3.97908815673888 bayes_pls_golite062009
ATPase activity, coupled to movement of substances 3.97858487787769 bayes_pls_golite062009
substrate-specific transporter activity 3.91409799494188 bayes_pls_golite062009
active transmembrane transporter activity 3.89128503869358 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 3.86345398417242 bayes_pls_golite062009
carbohydrate transmembrane transporter activity 3.38648305647717 bayes_pls_golite062009
ATPase activity, coupled 3.32937863234927 bayes_pls_golite062009
sugar transmembrane transporter activity 3.24821418227125 bayes_pls_golite062009
ATPase activity 3.08226330066871 bayes_pls_golite062009
nucleoside-triphosphatase activity 3.00619776756793 bayes_pls_golite062009
pyrophosphatase activity 2.93295939960055 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 2.91418221359376 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 2.91133868200651 bayes_pls_golite062009
sugar:hydrogen symporter activity 2.72644761294537 bayes_pls_golite062009
cation:sugar symporter activity 2.72644761294537 bayes_pls_golite062009
ion transmembrane transporter activity 2.70116960945763 bayes_pls_golite062009
maltooligosaccharide-importing ATPase activity 2.68379505688616 bayes_pls_golite062009
solute:hydrogen symporter activity 1.84116772499041 bayes_pls_golite062009
cation transmembrane transporter activity 1.82526327874202 bayes_pls_golite062009
hydrolase activity 1.57867403354317 bayes_pls_golite062009
amine transmembrane transporter activity 1.35745015743741 bayes_pls_golite062009
secondary active transmembrane transporter activity 0.96228415837358 bayes_pls_golite062009
organic acid transmembrane transporter activity 0.86220210518613 bayes_pls_golite062009
carboxylic acid transmembrane transporter activity 0.851725653994868 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of ions 0.69074662322395 bayes_pls_golite062009
solute:cation symporter activity 0.483541714040201 bayes_pls_golite062009
symporter activity 0.483541714040201 bayes_pls_golite062009
catalytic activity 0.427775057748038 bayes_pls_golite062009
anion transmembrane transporter activity 0.38505555521505 bayes_pls_golite062009
sulfur amino acid transmembrane transporter activity 0.197768400248901 bayes_pls_golite062009
inorganic anion transmembrane transporter activity 0.171737154712589 bayes_pls_golite062009
carbohydrate-transporting ATPase activity 0.1609500785577 bayes_pls_golite062009
metal ion transmembrane transporter activity 0.14639856424105 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle