| Protein: | gi|7446132 |
| Organism: | Synechocystis sp. |
| Length: | 1693 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7446132.
| Description | E-value | Query Range |
Subject Range |
|
|
1363.0 | [0..7] | [1578..14] |
|
|
1357.0 | [0..11] | [1643..12] |
|
|
1356.0 | [0..7] | [1578..14] |
|
|
1303.0 | [0..6] | [1627..13] |
|
Region A: Residues: [1-141] |
1 11 21 31 41 51
| | | | | |
1 MTVMLSCLTQ QQELLQSLAD RVGQPAIQDN LYFCLAGQFT WVEDWYTTAI AGDVLIFDAG 60
61 EKEQLARVLQ QWEQFTGHVI LITGLTEEPD PQTFLTQLAL GKQQRCGERH FHWIVLVDPT 120
121 IEEAFRGLQT FLDGKSHWLD L
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [142-403] |
1 11 21 31 41 51
| | | | | |
1 RLGVGDLEQC TDELWQCVWL EPSPLAPEKR QEMLVNLPHW LAEIVDQKQN LELEPISLLQ 60
61 AKLSLLQGLA RESRGEMGRK QAQCHYRESL DVWELLGDTE AIIWLSLRLG YLFLLQAYGE 120
121 KSRGHQLWQQ TRNYAQTAIA ALENQQWHFT HGETLNLLGE ILRGLEDWEQ LRQAAENSLI 180
181 FFYQLSPFAA TDTTPERNQE KLWTELELQG LISLAHSYLC EALVEQWKFD EGKEALKRAF 240
241 ETRPKQVEER DYRPCLANLH YL
|
| Detection Method: | |
| Confidence: | 25.045757 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peroxisome targeting sequence binding | 5.59105468633314 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 4.51110304836456 | bayes_pls_golite062009 |
| N-acyltransferase activity | 4.23248684026139 | bayes_pls_golite062009 |
| acetyltransferase activity | 3.92366482959 | bayes_pls_golite062009 |
| acyltransferase activity | 3.39041465099548 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups other than amino-acyl groups | 3.3543191614921 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 3.18180008263301 | bayes_pls_golite062009 |
| unfolded protein binding | 3.15627917109528 | bayes_pls_golite062009 |
| peroxisome matrix targeting signal-1 binding | 3.00002055858836 | bayes_pls_golite062009 |
| RNA binding | 2.76684454218635 | bayes_pls_golite062009 |
| binding | 2.71974493738804 | bayes_pls_golite062009 |
| signal sequence binding | 2.68460419248567 | bayes_pls_golite062009 |
| protein binding | 2.67835748923436 | bayes_pls_golite062009 |
| transcription regulator activity | 2.36571535004008 | bayes_pls_golite062009 |
| nucleic acid binding | 2.03244296439384 | bayes_pls_golite062009 |
| DNA binding | 1.95874073664777 | bayes_pls_golite062009 |
| soluble NSF attachment protein activity | 1.79506629366017 | bayes_pls_golite062009 |
| peptide binding | 1.62367735599503 | bayes_pls_golite062009 |
| transcription repressor activity | 1.41858884169884 | bayes_pls_golite062009 |
| transferase activity, transferring glycosyl groups | 1.39974507203417 | bayes_pls_golite062009 |
| heat shock protein binding | 1.35268080101836 | bayes_pls_golite062009 |
| transcription factor activity | 1.21805666483342 | bayes_pls_golite062009 |
| receptor activity | 1.19949789380979 | bayes_pls_golite062009 |
| transferase activity | 1.14940839435601 | bayes_pls_golite062009 |
| molecular transducer activity | 1.12788325078271 | bayes_pls_golite062009 |
| signal transducer activity | 1.12788325078271 | bayes_pls_golite062009 |
| ligase activity | 0.825764637499128 | bayes_pls_golite062009 |
| chaperone binding | 0.677143111475679 | bayes_pls_golite062009 |
| hydrolase activity | 0.619711232527193 | bayes_pls_golite062009 |
| transcription factor binding | 0.518146612491969 | bayes_pls_golite062009 |
| procollagen-proline 4-dioxygenase activity | 0.482467028485988 | bayes_pls_golite062009 |
| peptidyl-proline 4-dioxygenase activity | 0.482467028485988 | bayes_pls_golite062009 |
| peptidyl-proline dioxygenase activity | 0.482467028485988 | bayes_pls_golite062009 |
| procollagen-proline dioxygenase activity | 0.482467028485988 | bayes_pls_golite062009 |
| enzyme binding | 0.44905827271946 | bayes_pls_golite062009 |
| SMAD binding | 0.317832792665752 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.30464889749774 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.192538429095884 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.116119418380222 | bayes_pls_golite062009 |
| syntaxin binding | 0.0598606763736398 | bayes_pls_golite062009 |
| transcription activator activity | 0.0593768116971065 | bayes_pls_golite062009 |
| small GTPase binding | 0.0394561704024805 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.0274922636265745 | bayes_pls_golite062009 |
| GTPase binding | 0.0230090675760397 | bayes_pls_golite062009 |
| GTPase regulator activity | 0.0182110291463968 | bayes_pls_golite062009 |
|
Region A: Residues: [404-988] |
1 11 21 31 41 51
| | | | | |
1 AGRVQLANDQ IRESLMTLRQ AQTLVSFEDN PRLYLAILVE LRECYLQLED WLAALAIDQE 60
61 YQAREYRLGQ RAFIGPKPLP CWPEQRICRH PLAPEKMLGG GAEARSAVQS KTMVSLTWQD 120
121 LQKVWEQKPT PVLVLTGEPG VGKTSWLAGE VLQQMSPERV LLVDFTPHWA EKLWVHLGES 180
181 FSLPSLGQAT TPELVSALQA LPILDLLLVL DGENGSLPWQ KSPSLRQQEL AQVLWQWLLT 240
241 TSPSQGVRLL ISVPPTAIAD LYEELKGQLG EEHSLPPLQY QTLSPPTLGQ AENWLTQAMA 300
301 QCRHPWPPSL QSQFLGDLAM EGNGEQQPWL HPIDLQLLGT VLEQEQVTKS ADYQGKKLDE 360
361 WLTLAVQTYL AFLPPHLLKK ALQLLKSLAD GQQALCLKTE YQLLAALYSA PEPAADNPPE 420
421 FAQEDIQQLQ LLLTLLLRGR LIIVISQATL PYYRLSTTHL AHALQGKSAV ISTPALINAG 480
481 RRGSKSNPNL IAPSPGDRQQ GNEDLIAELE AGSSAEEQVV AQKLKAAQLQ YQKLVAGINL 540
541 EKQCQFILKQ FLVYPLEALL AAVKTGQDLQ KLVTPETPLV QYPSL
|
| Detection Method: | |
| Confidence: | 51.522879 |
| Match: | 1z6tA |
| Description: | Structure of the apoptotic protease-activating factor 1 bound to ADP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [989-1146] |
1 11 21 31 41 51
| | | | | |
1 APWLSLHSIL ARINECNRCH HEGPVTVLRI SPSMENTPPL VLTATTNGIA YLWSFHGELI 60
61 NVLRGHQEAI TALDWSADGQ YFATASADHT VKLWQRHGEE VATLRGHEDW VRSVHFSPHH 120
121 QFLVTSGQDN TARIWNFAGE QLTLCQGHAD WVRNAEFN
|
| Detection Method: | |
| Confidence: | 72.69897 |
| Match: | 2ovpB |
| Description: | No description for 2ovpB was found. |
|
Region A: Residues: [1147-1493] |
1 11 21 31 41 51
| | | | | |
1 CHGQILLTAS RDGTARLWDL EGREIGLCQG HTSWVRNAQF SPDGQWIVTC SADGTARLWD 60
61 LSSQCFAVLK GHQNWVNNAL WSPDGQHIIT SSSDGTARVW SRHGKCLGTL RGHDHNIHGA 120
121 RFSLDGQKIV TYSTDNTARL WTKEGTLLTI LRGHQKEVYD ADFSADGRFV FTVSADQTAR 180
181 QWDISQKDTI TLTGHSHWVR NAHFNPKGDR LLTVSRDKTA RLWTTEGECV AVLADHQGWV 240
241 REGQFSPDGQ WIVTGSADKT AQLWNVLGKK LTVLRGHQDA VLNVRFSPDS QYIVTASKDG 300
301 TARVWNNTGR ELAVLRHYEK NIFAAEFSAD GQFIVTASDD NTAGIWE
|
| Detection Method: | |
| Confidence: | 3.39794 |
| Match: | 2gbcA |
| Description: | No description for 2gbcA was found. |
|
Region A: Residues: [1494-1577] |
1 11 21 31 41 51
| | | | | |
1 IVGREVGICR GHEGPVYFAQ FSADSRYILT ASVDNTARIW DFLGRPLLTL AGHQSIVYQA 60
61 RFSPEGNLIA TVSADHTARL WDRS
|
| Detection Method: | |
| Confidence: | 3.79 |
| Match: | 1r5mA |
| Description: | Crystal Structure Of The C-Terminal WD40 Domain Of Sif2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1578-1693] |
1 11 21 31 41 51
| | | | | |
1 GKTVAVLYGH QGLVGTVDWS PDGQMLVTAS NDGTARLWDL SGRELLTLEG HGNWVRSAEF 60
61 SPDGRWVLTS SADGTAKLWP VKTLPQLLSQ GGQWLKNYLT HNALVSPADR PGAKVT
|
| Detection Method: | |
| Confidence: | 84.69897 |
| Match: | 2gnqA |
| Description: | No description for 2gnqA was found. |
