| Protein: | gi|15889246, gi|... |
| Organism: | Agrobacterium tumefaciens str. C58 |
| Length: | 136 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15889246, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
212.0 | [0..3] | [136..31] |
|
|
207.0 | [0..11] | [136..10] |
|
|
205.0 | [0..11] | [136..19] |
|
|
205.0 | [0..9] | [136..130] |
|
|
204.0 | [0..6] | [136..13] |
|
|
204.0 | [0..5] | [136..3] |
|
|
204.0 | [0..14] | [136..1] |
|
|
204.0 | [0..7] | [136..12] |
|
|
204.0 | [0..14] | [136..1] |
|
|
203.0 | [0..14] | [136..1] |
|
Region A: Residues: [1-136] |
1 11 21 31 41 51
| | | | | |
1 MRVAKVVFAR DGYMPTVNQL IRKPRQAQVK RNKVPALQEN PQKRGVCTRV YTTTPKKPNS 60
61 ALRKVAKIRL TNGFEVIGYI PGEGHNLQEH SVVMIRGGRV KDLPGVRYHI IRGVLDTQGV 120
121 KNRKQRRSKY GAKRPK
|
| Detection Method: |  |
| Confidence: | 50.69897 |
| Match: | 1vs5L |
| Description: | No description for 1vs5L was found. |
| Term | Confidence | Notes |
| structural constituent of ribosome | 7.45319063235379 | bayes_pls_golite062009 |
| structural molecule activity | 6.87843523680097 | bayes_pls_golite062009 |
| misfolded RNA binding | 4.4877915495248 | bayes_pls_golite062009 |
| nucleic acid binding | 3.7132569326175 | bayes_pls_golite062009 |
| RNA binding | 3.30183895019873 | bayes_pls_golite062009 |
| DNA binding | 2.94486937698231 | bayes_pls_golite062009 |
| 2.80746531284205 | bayes_pls_golite062009 | |
| binding | 2.40532042551671 | bayes_pls_golite062009 |
| mRNA binding | 1.65819015373151 | bayes_pls_golite062009 |
| translation regulator activity | 1.46320772716954 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 1.40718318783582 | bayes_pls_golite062009 |
| translation initiation factor activity | 1.27539679024898 | bayes_pls_golite062009 |
| transcription regulator activity | 1.24522359765541 | bayes_pls_golite062009 |
| protein binding | 1.20309946451799 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.10289736160471 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.96886436248958 | bayes_pls_golite062009 |
| ribonuclease activity | 0.91658673456122 | bayes_pls_golite062009 |
| transcription factor activity | 0.672797026326101 | bayes_pls_golite062009 |
| transcription activator activity | 0.581984534552921 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 0.474251377131502 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 0.47336621289748 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 0.47336621289748 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 0.438266295385131 | bayes_pls_golite062009 |
| exoribonuclease activity | 0.39131721416336 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.3506031439435 | bayes_pls_golite062009 |
| nuclease activity | 0.17660139576327 | bayes_pls_golite062009 |
| RNA polymerase activity | 0.1542034177713 | bayes_pls_golite062009 |
| DNA-directed RNA polymerase activity | 0.1542034177713 | bayes_pls_golite062009 |
| transcription factor binding | 0.132487446755259 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 0.0717589400404304 | bayes_pls_golite062009 |
