| Protein: | gi|62861862, gi|... |
| Organism: | Drosophila melanogaster |
| Length: | 640 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|62861862, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
395.0 | [0..1] | [640..91] |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MDPKMHLLFG SGQGLMESEF IDSGSTSACG SGSSSLEQMS QLVQMDNLID SSSGAKLKVP 60
61 LQSIGVDVPP QVLQVSTVLE NPTRYHVIQK QKNQVRQYLS ESFKPSMW
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [109-297] |
1 11 21 31 41 51
| | | | | |
1 GSHTSEIKLA NNSASTGNLQ NSSLQKGICD PLERTNRFGC DSAVSAKRIM PSDDAMPISP 60
61 FGGSFVRCDD INPIEPTVLR PNSHGAGEPE NAHRTAQLGL SKANSSLSST RSSSGIVNSI 120
121 RISSTSSSLQ STSAPISPSV SSVATSVSEL PSFDSDPDDI FDDILQNDSF NFDKNFNSEL 180
181 SIKQEPQNL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [298-409] |
1 11 21 31 41 51
| | | | | |
1 TDAEMNALAK DRQKKDNHNM IERRRRFNIN DRIKELGTLL PKGSDAFYEV VRDIRPNKGT 60
61 ILKSSVDYIK CLKHEVTRLR QNELRQRQVE LQNRKLMSRI KELEMQAKSH GI
|
| Detection Method: | |
| Confidence: | 14.0 |
| Match: | 1nkpA |
| Description: | Myc prot-oncogene protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.38658950816179 | bayes_pls_golite062009 |
| DNA binding | 5.18654839258297 | bayes_pls_golite062009 |
| nucleic acid binding | 5.05768805749761 | bayes_pls_golite062009 |
| transcription factor activity | 4.78039531631248 | bayes_pls_golite062009 |
| transcription activator activity | 3.87875547821718 | bayes_pls_golite062009 |
| binding | 3.81829206350975 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 3.42035985454056 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.39500382187264 | bayes_pls_golite062009 |
| protein binding | 2.64975291677725 | bayes_pls_golite062009 |
| transcription factor binding | 2.61163564741984 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity, enhancer binding | 2.42306484786159 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.52770895937238 | bayes_pls_golite062009 |
| transcription repressor activity | 0.955588849035129 | bayes_pls_golite062009 |
| promoter binding | 0.8576109846276 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.801830750183111 | bayes_pls_golite062009 |
| protein heterodimerization activity | 0.53175615551166 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.3513586903977 | bayes_pls_golite062009 |
| protein dimerization activity | 0.20674648626116 | bayes_pls_golite062009 |
|
Region A: Residues: [410-568] |
1 11 21 31 41 51
| | | | | |
1 LLSENHLTSL SAPTQPYLKS FSLSPTASRS RRSLFDQPVE KKIQVIDGAD GNMGMNQVDE 60
61 FMEDCKYAVQ GGDPMLSSHS HMQSAPQSPS SKTLNSGSFE PKNFSEADES LFRGKSSLAS 120
121 DDCCGINCST SCYIQHQLTS REGHPNHSHH TGIREIHSL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [569-640] |
1 11 21 31 41 51
| | | | | |
1 SDSAQNSEFS RLEHCDDPLL SSSHRSLGTV DEDQHNSVDM SAVMVHDSLS SLVDDNNSET 60
61 MVLASDTLDI EL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
