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View Structure Prediction Details

Protein: gi|34146798, gi|...
Organism: Arabidopsis thaliana
Length: 220 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34146798, gi|....

Description E-value Query
Range
Subject
Range
gi|76655942 - gi|76655942|ref|XP_874005.1| PREDICTED: similar to SLD5 [Bos taurus]
260.0 [0..6] [220..277]

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Predicted Domain #1
Region A:
Residues: [1-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASNSEAGGS ADYETLMSTS DVELLKRAWR NEKAAPEILQ YEGALVDRAK EQIELVEETI  60
   61 EDYVENGIDP LVVSLYQMDL DRAQFLLRSY LRVRLLKIEK FMFHNLNSEE AERRLSEQEK 120
  121 VFATRCADDL AKHFEETVLL KLPENYQSVL KQSLISEVDD MVPQPHLDTF VVCRSKNFVS 180
  181 LNLYEEGESP ETVEMERGDL YFIRYKIVKR AIESGQIDLI 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.69897
Match: 2e9xD
Description: No description for 2e9xD was found.

Predicted functions:

Term Confidence Notes
3'-5' DNA helicase activity 3.30007058745861 bayes_pls_golite062009
DNA helicase activity 2.7662250039458 bayes_pls_golite062009
binding 1.86366637427031 bayes_pls_golite062009
protein binding 1.52285169518311 bayes_pls_golite062009
transcription regulator activity 1.2336233528067 bayes_pls_golite062009
helicase activity 1.2110072302388 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.406116199163083 bayes_pls_golite062009
pyrophosphatase activity 0.350000641617868 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.33576520693158 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.333445385039412 bayes_pls_golite062009
catalytic activity 0.161911144249814 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle