YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30260986, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	276 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260986, gi|....

Description	E-value	Query Range	Subject Range
gi\|39998014, gi\|... - gi\|39998014\|ref\|NP_953965.1\| glutamate racemase [Geobacter sulfurreducens PCA], gi\|39984959\|gb\|AAR36...	7.0E-81	[6..273]	[2..271]
gi\|29894563, gi\|... - gi\|30019021\|ref\|NP_830652.1\| glutamate racemase [Bacillus cereus ATCC 14579], gi\|29894563\|gb\|AAP0785... gi\|229126278, gi... - gi\|229126278\|ref\|ZP_04255296.1\| Glutamate racemase [Bacillus cereus BDRD-Cer4], gi\|228657270\|gb\|EEL1...	4.0E-80	[1..276]	[1..276]
gi\|25291677 - pir\|\|AF1818 glutamate racemase [imported] - Nostoc sp. (strain PCC 7120) MURI_NOSS1 - Glutamate racemase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=murI PE=3 SV=1	9.0E-79	[2..266]	[15..278]
gi\|186682253, gi... - gi\|23125873\|ref\|ZP_00107790.1\| COG0796: Glutamate racemase [Nostoc punctiforme PCC 73102], gi\|186682...	2.0E-78	[6..265]	[20..277]
MURI_ANAVT - Glutamate racemase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=murI PE=3 SV=1	2.0E-78	[6..266]	[20..278]
MURI_STAHJ - Glutamate racemase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=murI PE=3 SV=1	3.0E-78	[7..269]	[2..266]
MURI_SYNY3 - Glutamate racemase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=murI PE=3 SV=1 MURI_SYNY3 - Glutamate racemase OS=Synechocystis sp. (strain ATCC 27184 / PCC 6803 / N-1) GN=murI PE=3 SV=1 gi\|7428368 - pir\|\|S74824 glutamate racemase (EC 5.1.1.3) - Synechocystis sp. (strain PCC 6803)	6.0E-78	[3..275]	[1..272]
MURI_STAAN - Glutamate racemase OS=Staphylococcus aureus (strain N315) GN=murI PE=1 SV=1 MURI_STAAW - Glutamate racemase OS=Staphylococcus aureus (strain MW2) GN=murI PE=3 SV=1 gi\|87161415\|ref\|... - glutamate racemase [Staphylococcus aureus subsp. aureus USA300], glutamate racemase [Staphylococcus ... MURI_STAAM - Glutamate racemase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=murI PE=3 SV=1 MURI_STAAT - Glutamate racemase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=murI PE=3 SV=1 MURI_STAA8 - Glutamate racemase OS=Staphylococcus aureus (strain NCTC 8325) GN=murI PE=3 SV=1 gi\|221138657 - gi\|221138657\|ref\|ZP_03563459.1\| glutamate racemase [Staphylococcus aureus subsp. aureus str. JKD6008... MURI_STAA3 - Glutamate racemase OS=Staphylococcus aureus (strain USA300) GN=murI PE=3 SV=1 gi\|269202763\|ref... - glutamate racemase [Staphylococcus aureus subsp. aureus ED98] gi\|221140452 - gi\|221140452\|ref\|ZP_03564945.1\| glutamate racemase [Staphylococcus aureus subsp. aureus str. JKD6009... MURI_STAA2 - Glutamate racemase OS=Staphylococcus aureus (strain JH1) GN=murI PE=3 SV=1 MURI_STAA9 - Glutamate racemase OS=Staphylococcus aureus (strain JH9) GN=murI PE=3 SV=1 gi\|251802426, gi... - gi\|251814055\|ref\|ZP_04828528.1\| glutamate racemase [Staphylococcus aureus subsp. aureus TCH70], gi\|2... gi\|253317067 - gi\|253317067\|ref\|ZP_04840280.1\| glutamate racemase [Staphylococcus aureus subsp. aureus str. CF-Mars... MURI_STAAS - Glutamate racemase OS=Staphylococcus aureus (strain MSSA476) GN=murI PE=3 SV=1 gi\|253731764, gi... - gi\|253731764\|ref\|ZP_04865929.1\| glutamate racemase [Staphylococcus aureus subsp. aureus USA300_TCH95... MURI_STAA1 - Glutamate racemase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=murI PE=3 SV=1 gi\|253733613, gi... - gi\|253733613\|ref\|ZP_04867778.1\| glutamate racemase [Staphylococcus aureus subsp. aureus TCH130], gi\|... MURI_STAAE - Glutamate racemase OS=Staphylococcus aureus (strain Newman) GN=murI PE=3 SV=1 gi\|255005936 - gi\|255005936\|ref\|ZP_05144537.2\| glutamate racemase [Staphylococcus aureus subsp. aureus Mu50-omega] gi\|25291670 - pir\|\|B89886 glutamate racemase [imported] - Staphylococcus aureus (strain N315) MURI_STAAC - Glutamate racemase OS=Staphylococcus aureus (strain COL) GN=murI PE=3 SV=1	8.0E-78	[7..268]	[2..265]
gi\|69246346, gi\|... - gi\|69246346\|ref\|ZP_00603902.1\| Glutamate racemase [Enterococcus faecium DO], gi\|68195299\|gb\|EAN09750...	8.0E-78	[1..267]	[5..274]
gi\|47776277 - gi\|47776277\|dbj\|BAD20742.1\| glutamate racemase [Bacillus subtilis]	1.0E-77	[7..273]	[2..271]

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Predicted Domain #1

Region A:
Residues: [1-276]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVCHKHSVI GVLDSGVGGL TVASEIIRQL PKESICYIGD NERCPYGPRS VEEVQSFVFE  60
   61 MVEFLKQFPL KALVVACNTA AAATLAALQE ALSIPVIGVI HPGARAAIKV TKKGKIGVIG 120
  121 TVGTIQSNMY EKALHELDTY LKVHSHACPT LATVVENRLE DTAYVTQQVK QALLPLTKED 180
  181 IDTLILGCTH YPLLESYIKK ELGEDVTIIS SAEETAIELS TILQHKGILA DNLNPKHRFF 240
  241 TTGSVSSFEH IAERWLGYQI SVDCVDLPVK NARICN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	78.39794
Match:	2dwuA
Description:	No description for 2dwuA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits