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View Structure Prediction Details

Protein: gi|30260810, gi|...
Organism: Bacillus anthracis str. Ames
Length: 301 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260810, gi|....

Description E-value Query
Range
Subject
Range
gi|150390667, gi... - gi|77683645|ref|ZP_00799091.1| Binding-protein-dependent transport systems inner membrane component ...
7.0E-58 [3..299] [11..303]
gi|10172642, gi|... - gi|15612593|ref|NP_240896.1| oligopeptide ABC transporter (permease) [Bacillus halodurans C-125], gi...
gi|25296705 - pir||F83653 oligopeptide ABC transporter (permease) BH0030 [imported] - Bacillus halodurans (strain ...
3.0E-56 [3..299] [8..300]
DPPC_BACPE - Dipeptide transport system permease protein DppC OS=Bacillus pseudofirmus (strain OF4) GN=dppC PE=3 ...
gi|11277274, gi|... - gi|1813497|gb|AAB41690.1| dipeptide transporter protein DppC [Bacillus firmus], pir||T44637 dipeptid...
DPPC_BACPF - Dipeptide transport system permease protein dppC OS=Bacillus pseudofirmus GN=dppC PE=3 SV=1
8.0E-56 [1..299] [9..303]
gi|110620064, gi... - gi|147921516|ref|YP_684668.1| putative ABC-type peptide transport system, permease component 2 [uncu...
4.0E-55 [22..300] [34..308]
gi|23100522, gi|... - gi|23100522|ref|NP_693989.1| oligopeptide ABC transporter permease [Oceanobacillus iheyensis HTE831]...
1.0E-54 [6..300] [10..300]
gi|56378846, gi|... - gi|56419004|ref|YP_146322.1| dipeptide ABC transporter (permease) [Geobacillus kaustophilus HTA426],...
2.0E-54 [4..299] [7..298]
gi|134052991, gi... - gi|88945336|ref|ZP_01148513.1| oligopeptide ABC transporter permease [Desulfotomaculum reducens MI-1...
4.0E-54 [1..300] [1..296]
gi|158140582, gi... - gi|158320383|ref|YP_001512890.1| binding-protein-dependent transport systems inner membrane componen...
4.0E-54 [18..299] [25..302]

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Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLANPEKQTE VIHYEKIPSG FSIMWREFRK DKLAMFSLFF LALILIAVYT TSFIMKQEDI  60
   61 VRVDLFAIYD PPSAEHWLGT DYGG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [85-301]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RDIFGQLIIG TRNSFTVGLA ITLLSTLIGL TMGLIAGYFG GVVDNIIMRF IDFMMILPFL  60
   61 MIVIVFISLV PTFNITTFIL IMTAFLWVGK ARLIRSKVLT EKELDYVSAS KTLGTPNWKI 120
  121 IFQQILPNLS SIIIVNITLN LAGNIGIESS LTYLGFGLPE STPSLGTLVS YATNPDVLQE 180
  181 KWWIWLPASI MILVLMLCIN FIGQALKRAA DARQRKG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.0
Match: 2onkC
Description: No description for 2onkC was found.

Predicted functions:

Term Confidence Notes
substrate-specific transmembrane transporter activity 5.53893649130886 bayes_pls_golite062009
ion transmembrane transporter activity 4.80599031209315 bayes_pls_golite062009
transporter activity 4.47791794099048 bayes_pls_golite062009
transmembrane transporter activity 4.39634414867723 bayes_pls_golite062009
cation transmembrane transporter activity 4.07572277826928 bayes_pls_golite062009
active transmembrane transporter activity 3.89128503869358 bayes_pls_golite062009
primary active transmembrane transporter activity 3.78071702105421 bayes_pls_golite062009
P-P-bond-hydrolysis-driven transmembrane transporter activity 3.78024819585319 bayes_pls_golite062009
ATPase activity, coupled to movement of substances 3.76710689838502 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances 3.76710689838502 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of substances 3.76480875126102 bayes_pls_golite062009
substrate-specific transporter activity 3.65928254714629 bayes_pls_golite062009
ATPase activity, coupled 3.13976951511862 bayes_pls_golite062009
ATPase activity 2.90304684848114 bayes_pls_golite062009
nucleoside-triphosphatase activity 2.85886572725081 bayes_pls_golite062009
pyrophosphatase activity 2.78799656158331 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 2.76854894183109 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 2.76635806953632 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of ions 2.42763030383098 bayes_pls_golite062009
metal ion transmembrane transporter activity 2.08437073771868 bayes_pls_golite062009
transition metal ion transmembrane transporter activity 1.74937989644368 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 1.67980146745927 bayes_pls_golite062009
anion transmembrane transporter activity 1.61276316467788 bayes_pls_golite062009
hydrolase activity 1.52360037846731 bayes_pls_golite062009
inorganic anion transmembrane transporter activity 1.44536001862407 bayes_pls_golite062009
anion transmembrane-transporting ATPase activity 1.03950605530203 bayes_pls_golite062009
secondary active transmembrane transporter activity 0.96228415837358 bayes_pls_golite062009
di-, tri-valent inorganic cation transmembrane transporter activity 0.798639167073698 bayes_pls_golite062009
sulfate transmembrane transporter activity 0.72950761930647 bayes_pls_golite062009
symporter activity 0.483541714040201 bayes_pls_golite062009
solute:cation symporter activity 0.483541714040201 bayes_pls_golite062009
catalytic activity 0.427775057748038 bayes_pls_golite062009
sulfate transmembrane-transporting ATPase activity 0.332859286932705 bayes_pls_golite062009
sugar transmembrane transporter activity 0.149318428666465 bayes_pls_golite062009
carbohydrate transmembrane transporter activity 0.0202682073710961 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle