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View Structure Prediction Details

Protein: gi|29654056, gi|...
Organism: Coxiella burnetii RSA 493
Length: 293 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29654056, gi|....

Description E-value Query
Range
Subject
Range
gi|10440052 - gi|10440052|dbj|BAB15633.1| unnamed protein product [Homo sapiens]
329.0 [0..5] [293..44]
gi|114554175, gi... - gi|114554175|ref|XP_001149966.1| PREDICTED: agmatine ureohydrolase (agmatinase) isoform 2 [Pan trogl...
328.0 [0..5] [293..44]
gi|78063634, gi|... - gi|78063634|ref|YP_373542.1| agmatinase [Burkholderia sp. 383], gi|77971519|gb|ABB12898.1| agmatinas...
322.0 [0..8] [291..15]
gi|73950741 - gi|73950741|ref|XP_544555.2| PREDICTED: similar to Agmatinase, mitochondrial precursor (Agmatine ure...
320.0 [0..5] [293..44]
gi|57032946 - gi|57032946|gb|AAH88880.1| Agmat-prov protein [Xenopus tropicalis]
318.0 [0..11] [293..88]
gi|57920942, gi|... - gi|57920942|gb|AAH89134.1| MGC85123 protein [Xenopus laevis], gi|147900416|ref|NP_001089210.1| hypot...
318.0 [0..11] [293..91]
gi|115313824, gi... - gi|182889192|gb|AAI64767.1| Zgc:153353 protein [Danio rerio], gi|117606228|ref|NP_001071019.1| agmat...
317.0 [0..9] [293..66]

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Predicted Domain #1
Region A:
Residues: [1-293]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKCLPPEKAF LGLEPQKAVP YEKAKAVIIP FGLERSVSYG GGTAQGPAAM IEASFEVELF  60
   61 DEALWCEPYC DIGIVTLEEP KIEADMQSAL KQLETLVQQV LDDEKFPFVF GGEHSITAGS 120
  121 IRPFVNAYDN LAILHFDAHA DLRDGYEGEH YSHASAIRRC LDYPSVEVIS VGIRNISAEE 180
  181 IPFFEANRNR IHIYWAKDKK TWDINEIIAP LKNRPIYLTF DLDGFDASLM PATGTPEPGG 240
  241 LFWNDAQEII TAAGQVGTIV GADINELAPI PGFHSCDFLA AKLAYKILSS AFK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 75.39794
Match: 1pq3A
Description: Human Arginase II: Crystal Structure and Physiological Role in Male and Female Sexual Arousal
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
agmatinase activity 3.73238467801147 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 1.72243397396987 bayes_pls_golite062009
catalytic activity 1.68836803454021 bayes_pls_golite062009
protein deacetylase activity 1.29904902150637 bayes_pls_golite062009
histone deacetylase activity 1.25334418126662 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines 1.01223037319069 bayes_pls_golite062009
deacetylase activity 0.616633535035513 bayes_pls_golite062009
transcription factor binding 0.48632720319646 bayes_pls_golite062009
transcription regulator activity 0.359136428158927 bayes_pls_golite062009
hydrolase activity 0.18398021468136 bayes_pls_golite062009
transcription repressor activity 0.13614857264874 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides 0.0917282383800223 bayes_pls_golite062009

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