| Protein: | 3MMP_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 384 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for 3MMP_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
339.0 | [0..8] | [384..1] |
|
Region A: Residues: [1-384] |
1 11 21 31 41 51
| | | | | |
1 MVRICVFMVF LLFFAPSPVS AGFYTNSSAI PPQLLRNATG NPWNSFLNFT GCHAGKKYDG 60
61 LYMLKQYFQH FGYITETNLS GNFTDDFDDI LKNAVEMYQR NFQLNVTGVL DELTLKHVVI 120
121 PRCGNPDVVN GTSTMHSGRK TFEVSFAGRG QRFHAVKHYS FFPGEPRWPR NRRDLTYAFD 180
181 PRNALTEEVK SVFSRAFTRW EEVTPLTFTR VERFSTSDIS IGFYSGEHGD GEPFDGPMRT 240
241 LAHAFSPPTG HFHLDGEENW IVSGEGGDGF ISVSEAVDLE SVAVHEIGHL LGLGHSSVEG 300
301 SIMYPTIRTG RRKVDLTTDD VEGVQYLYGA NPNFNGSRSP PPSTQQRDTG DSGAPGRSDG 360
361 SRSVLTNLLQ YYFWIIFGLF LYLV
|
| Detection Method: |  |
| Confidence: | 80.69897 |
| Match: | 1su3A |
| Description: | X-ray structure of human proMMP-1: New insights into collagenase action |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 5.33358263548929 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 4.99457783001146 | bayes_pls_golite062009 |
| endopeptidase activity | 4.16532996235931 | bayes_pls_golite062009 |
| metallopeptidase activity | 3.94798058866011 | bayes_pls_golite062009 |
| metalloendopeptidase activity | 3.43236442601127 | bayes_pls_golite062009 |
| hydrolase activity | 2.63109625301237 | bayes_pls_golite062009 |
| receptor binding | 2.39767049122449 | bayes_pls_golite062009 |
| exopeptidase activity | 2.07461908743946 | bayes_pls_golite062009 |
| binding | 1.08558665967526 | bayes_pls_golite062009 |
| catalytic activity | 0.891187593353827 | bayes_pls_golite062009 |
| growth factor activity | 0.720944017870466 | bayes_pls_golite062009 |
| integrin binding | 0.57684135424992 | bayes_pls_golite062009 |
| zinc ion binding | 0.49304764842799 | bayes_pls_golite062009 |
| aminopeptidase activity | 0.489265029264191 | bayes_pls_golite062009 |
| serine hydrolase activity | 0.393080846858665 | bayes_pls_golite062009 |
| serine-type peptidase activity | 0.374597710524442 | bayes_pls_golite062009 |
| protein binding | 0.2751534129453 | bayes_pls_golite062009 |
| peptidyl-dipeptidase activity | 0.27229268642689 | bayes_pls_golite062009 |
| serine-type endopeptidase activity | 0.252655558968584 | bayes_pls_golite062009 |
| cytokine receptor binding | 0.0255053415182105 | bayes_pls_golite062009 |
| ion binding | 0.0127744064783182 | bayes_pls_golite062009 |
