| Protein: | gi|11559508 |
| Organism: | Plasmodium falciparum |
| Length: | 672 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11559508.
| Description | E-value | Query Range |
Subject Range |
|
|
419.0 | [0..1] | [370..1] |
|
|
418.0 | [0..1] | [370..1] |
|
|
399.0 | [0..1] | [359..67] |
|
Region A: Residues: [1-376] |
1 11 21 31 41 51
| | | | | |
1 MGIKGLTKFI ADAAPNAIKE IKIESLMGRI IAIDASMSLY QFIIAIRDSE QYGNLTNESG 60
61 ETTSHISGLM SRSIRLMENG LKPIYVFDGA PPELKGSELE KRGEKRQKAE ELLKKAKEEG 120
121 NLEEIKKQSG RTVRVTRKQN EEAKKLLTLM GIPIIEAPCE AESQCAFLTK YNLAHATATE 180
181 DADALVFGTK ILIRNLNANA TSNQNKNKNN SKRGYILTEI NLEQVLKGLN LTMDEFIDFC 240
241 ILCGCDYCDT IKGIGSKTAY NLIKEYNCIE KIIENIDQNK YQVPSNFRFQ EARKSFINPN 300
301 VLPKEDIKID WNEPQIEELK HFLIKDYNFN ELRVTNYINR LLKARKVTTQ RRLDNFFTAC 360
361 TKKSTKLIVE ETKKEQ
|
| Detection Method: |  |
| Confidence: | 107.0 |
| Match: | 1ul1X |
| Description: | Crystal structure of the human FEN1-PCNA complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity, acting on ester bonds | 5.44893156272125 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 4.17543266498933 | bayes_pls_golite062009 |
| DNA polymerase activity | 4.1412804577877 | bayes_pls_golite062009 |
| flap endonuclease activity | 4.10438637013244 | bayes_pls_golite062009 |
| exonuclease activity | 3.99717729574528 | bayes_pls_golite062009 |
| single-stranded DNA specific exodeoxyribonuclease activity | 3.90367500308359 | bayes_pls_golite062009 |
| endonuclease activity | 3.40075034200919 | bayes_pls_golite062009 |
| endodeoxyribonuclease activity | 3.29138075959109 | bayes_pls_golite062009 |
| deoxyribonuclease activity | 3.25110450559975 | bayes_pls_golite062009 |
| 5'-3' exonuclease activity | 3.19536858640519 | bayes_pls_golite062009 |
| nuclease activity | 2.9643999717473 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 2.76402807313057 | bayes_pls_golite062009 |
| single-stranded DNA specific endodeoxyribonuclease activity | 2.49388502336873 | bayes_pls_golite062009 |
| hydrolase activity | 2.4418166499042 | bayes_pls_golite062009 |
| ribonuclease activity | 2.33034300966639 | bayes_pls_golite062009 |
| 5'-3' exodeoxyribonuclease activity | 2.26658239783943 | bayes_pls_golite062009 |
| damaged DNA binding | 2.10834170214137 | bayes_pls_golite062009 |
| double-stranded DNA specific exodeoxyribonuclease activity | 2.09057967200253 | bayes_pls_golite062009 |
| binding | 2.06833406478856 | bayes_pls_golite062009 |
| nucleic acid binding | 2.02510018436829 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity | 2.0005433655378 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity, producing 5'-phosphomonoesters | 1.9833086883205 | bayes_pls_golite062009 |
| DNA binding | 1.93844174573408 | bayes_pls_golite062009 |
| 5'-flap endonuclease activity | 1.81850767854435 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.70042864382698 | bayes_pls_golite062009 |
| catalytic activity | 1.37534898662234 | bayes_pls_golite062009 |
| ribonuclease H activity | 1.29762010718359 | bayes_pls_golite062009 |
| single-stranded DNA specific 5'-3' exodeoxyribonuclease activity | 1.15948049342759 | bayes_pls_golite062009 |
| endodeoxyribonuclease activity, producing 5'-phosphomonoesters | 0.901965019685213 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.626785110524684 | bayes_pls_golite062009 |
| endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 0.512509234493511 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 0.50487165366129 | bayes_pls_golite062009 |
| protein binding | 0.488846604207788 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.351084053450465 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.319622686426271 | bayes_pls_golite062009 |
| endoribonuclease activity | 0.312346277055223 | bayes_pls_golite062009 |
| single-stranded DNA specific 3'-5' exodeoxyribonuclease activity | 0.14861832363159 | bayes_pls_golite062009 |
| 3'-5'-exodeoxyribonuclease activity | 0.0205129272358 | bayes_pls_golite062009 |
|
Region A: Residues: [377-486] |
1 11 21 31 41 51
| | | | | |
1 TLPARKGKKR PTAGDKNKQK AVKRKIEQAN ANGHHKMKEE NKSVDNEKNE DGIKSVDNEK 60
61 NEDGIKSVDD EKNLDDEKNL DDEKNKDDEK NKDDEKNKDD EKNKDDEKNK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [487-672] |
1 11 21 31 41 51
| | | | | |
1 DDEKKSLDNF SSNLFDSDKE SESGNIIKNE KQNMDDEKIN DNLPSLFGDH SRIRHTENKD 60
61 NISDINNNNN NNNSSSNNNN ISNNHFNSVS SNSTFNSSTK LKSEDTLKSN SPLKEDSPNS 120
121 YNNIKNNNHT ININSQINNH KEPISNNNLN NINNSTEIKK KNTLFLLPFC PKDVTNVKKK 180
181 KYTQRC
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
