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View Structure Prediction Details

Protein: WNK8_ARATH
Organism: Arabidopsis thaliana
Length: 563 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WNK8_ARATH.

Description E-value Query
Range
Subject
Range
gi|9757944 - gi|9757944|dbj|BAB08432.1| MAP kinase [Arabidopsis thaliana]
371.0 [0..10] [563..55]

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Predicted Domain #1
Region A:
Residues: [1-306]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGSGFLGQ ISSMEEADFA EKDPSGRYIR YDDVLGRGAF KTVYKAFDEV DGIEVAWNLV  60
   61 SIEDVMQMPG QLERLYSEVH LLKALKHENI IKLFYSWVDE KNKTINMITE LFTSGSLRVY 120
  121 RKKHRKVDPK AIKNWARQIL KGLNYLHSQN PPVIHRDLKC DNIFVNGNTG EVKIGDLGLA 180
  181 TVLQQPTARS VIGTPEFMAP ELYEEEYNEL VDIYSFGMCM LEMVTCEYPY NECRNQAQIY 240
  241 KKVTSNIKPQ SLGKVDDPQV RQFIEKCLLP ASSRPTALEL SKDPFLARDG GKDSALLASS 300
  301 STSSKY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.522879
Match: 1t4hA
Description: Crystal structure of the kinase domain of WNK1, a kinase that causes a hereditary form of hypertension
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphotransferase activity, alcohol group as acceptor 5.49988294224815 bayes_pls_golite062009
protein kinase activity 5.4586557943719 bayes_pls_golite062009
kinase activity 5.3287080791198 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 4.96052051118534 bayes_pls_golite062009
protein serine/threonine kinase activity 4.46381887831481 bayes_pls_golite062009
transferase activity 3.97138602499442 bayes_pls_golite062009
binding 2.74863538127007 bayes_pls_golite062009
ATP binding 1.97600611746091 bayes_pls_golite062009
adenyl ribonucleotide binding 1.93596671856664 bayes_pls_golite062009
adenyl nucleotide binding 1.90928021591891 bayes_pls_golite062009
purine ribonucleotide binding 1.65732943334212 bayes_pls_golite062009
ribonucleotide binding 1.65726906484847 bayes_pls_golite062009
purine nucleotide binding 1.63763394711025 bayes_pls_golite062009
nucleotide binding 1.63195828048121 bayes_pls_golite062009
protein tyrosine kinase activity 1.3898059094397 bayes_pls_golite062009
receptor signaling protein serine/threonine kinase activity 1.38496328649031 bayes_pls_golite062009
receptor signaling protein activity 1.27291233344322 bayes_pls_golite062009
protein binding 1.22565748038754 bayes_pls_golite062009
catalytic activity 1.21655087018101 bayes_pls_golite062009
cyclin-dependent protein kinase activity 0.499492353295369 bayes_pls_golite062009
protein serine/threonine/tyrosine kinase activity 0.48345772948903 bayes_pls_golite062009
magnesium ion binding 0.393328812780268 bayes_pls_golite062009
MAP kinase kinase kinase activity 0.37115026509016 bayes_pls_golite062009
MAP kinase kinase activity 0.35402045013148 bayes_pls_golite062009
signal transducer activity 0.270054246024761 bayes_pls_golite062009
molecular transducer activity 0.270054246024761 bayes_pls_golite062009
MAP kinase activity 0.26024936404169 bayes_pls_golite062009
transmembrane receptor protein kinase activity 0.0556163711947139 bayes_pls_golite062009
transmembrane receptor activity 0.00652065412910241 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [307-445]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VRPPQLEHLP MDVDHNENKS VSSNEDYPWS QTIELQRIAE NKEFRLRGER SDDVTASMVL  60
   61 RIADPSGKCR IVHFAFYLES DTATAIAEEM VEELHLTSQE VVVIADMIDD FIMQLLSDRT 120
  121 SSHHNQNSPR LTHEDHEAA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.21
Match: 2v3sA
Description: No description for 2v3sA was found.

Predicted Domain #3
Region A:
Residues: [446-563]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NQQTVNSKDE EAAGQSMKSD ISADYYFPYS ANDGNAAMEA GRDAESMSSY LDSCSMMSTI  60
   61 YNLSISDNDY PEDLKTELNL IESQFNQSFQ DLLKLKEDAI ENAKRKWITK KQKAVNIS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle