| Protein: | OGG1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 365 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OGG1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
263.0 | [0..1] | [335..1] |
|
Region A: Residues: [1-365] |
1 11 21 31 41 51
| | | | | |
1 MKRPRPTSQP SISSTVKPPL SPPVTPILKQ KLHRTGTPKW FPLKLTHTEL TLPLTFPTGQ 60
61 TFRWKKTGAI QYSGTIGPHL VSLRQRPGDD AVSYCVHCST SPKSAELALL DFLNAEISLA 120
121 ELWSDFSKKD PRFGELARHL RGARVLRQDP LECLIQFLCS SNNNIARITK MVDFVSSLGL 180
181 HLGDIDGFEF HQFPSLDRLS RVSEEEFRKA GFGYRAKYIT GTVNALQAKP GGGNEWLLSL 240
241 RKVELQEAVA ALCTLPGVGP KVAACIALFS LDQHSAIPVD THVWQIATNY LLPDLAGAKL 300
301 TPKLHGRVAE AFVSKYGEYA GWAQTLLFIA ELPAQKTLLQ SFSQPINKLD ESAEVNETSC 360
361 DTLKP
|
| Detection Method: |  |
| Confidence: | 62.39794 |
| Match: | 1fn7A |
| Description: | 8-oxoguanine glycosylase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA N-glycosylase activity | 4.8124964619976 | bayes_pls_golite062009 |
| hydrolase activity, hydrolyzing N-glycosyl compounds | 4.26870112679392 | bayes_pls_golite062009 |
| DNA-(apurinic or apyrimidinic site) lyase activity | 3.71152530486175 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 3.62178291472984 | bayes_pls_golite062009 |
| transcription regulator activity | 2.86205700023542 | bayes_pls_golite062009 |
| DNA binding | 2.5120791469793 | bayes_pls_golite062009 |
| oxidized base lesion DNA N-glycosylase activity | 2.49872706126491 | bayes_pls_golite062009 |
| nucleic acid binding | 2.39934080314995 | bayes_pls_golite062009 |
| hydrolase activity | 2.39042189031819 | bayes_pls_golite062009 |
| 8-oxo-7,8-dihydroguanine DNA N-glycosylase activity | 2.21048599823382 | bayes_pls_golite062009 |
| hydrolase activity, acting on glycosyl bonds | 2.18053745735048 | bayes_pls_golite062009 |
| binding | 2.13602784299456 | bayes_pls_golite062009 |
| catalytic activity | 2.13345932727422 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.08009333103564 | bayes_pls_golite062009 |
| damaged DNA binding | 2.00388798014411 | bayes_pls_golite062009 |
| alkylbase DNA N-glycosylase activity | 1.5832578018127 | bayes_pls_golite062009 |
| oxidized purine base lesion DNA N-glycosylase activity | 1.32985950765371 | bayes_pls_golite062009 |
| oxidized pyrimidine base lesion DNA N-glycosylase activity | 1.2016453685638 | bayes_pls_golite062009 |
| DNA-3-methyladenine glycosylase I activity | 1.06383943982125 | bayes_pls_golite062009 |
| transcription factor activity | 0.91701565472544 | bayes_pls_golite062009 |
| transcription factor binding | 0.88531282989512 | bayes_pls_golite062009 |
| uracil DNA N-glycosylase activity | 0.879508131574476 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.85419760398899 | bayes_pls_golite062009 |
| purine-specific mismatch base pair DNA N-glycosylase activity | 0.68578837518217 | bayes_pls_golite062009 |
| protein binding | 0.663243680565331 | bayes_pls_golite062009 |
| mismatch base pair DNA N-glycosylase activity | 0.661651574677137 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.57099109384393 | bayes_pls_golite062009 |
| RNA polymerase III transcription factor activity | 0.365027701616215 | bayes_pls_golite062009 |
| carbon-oxygen lyase activity | 0.0676784802238829 | bayes_pls_golite062009 |
