Protein: | gi|190405053 |
Organism: | Saccharomyces cerevisiae RM11-1a |
Length: | 266 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190405053.
Description | E-value | Query Range |
Subject Range |
|
2.0E-97 | [1..266] | [1..266] |
|
1.0E-86 | [1..257] | [1..214] |
|
2.0E-84 | [1..261] | [1..217] |
|
3.0E-84 | [1..260] | [1..215] |
|
3.0E-77 | [1..260] | [1..215] |
|
2.0E-69 | [8..262] | [6..216] |
Region A: Residues: [1-121] |
1 11 21 31 41 51 | | | | | | 1 MNYLEGVGSK KGGGGIASES QFNLQRRKEV ESLLSKGENV PYTFQDEKDD QVRSNPYIYK 60 61 NHSGKLVCKL CNTMHMSWSS VERHLGGKKH GLNVLRRGIS IEKSSLGREG QTTHDFRQQQ 120 121 K |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Term | Confidence | Notes |
transcription regulator activity | 3.37529385176635 | bayes_pls_golite062009 |
DNA binding | 3.3049326844117 | bayes_pls_golite062009 |
nucleic acid binding | 3.24981360535232 | bayes_pls_golite062009 |
snRNA binding | 3.16782731106334 | bayes_pls_golite062009 |
RNA binding | 3.11293528368816 | bayes_pls_golite062009 |
U1 snRNA binding | 2.86343975521155 | bayes_pls_golite062009 |
binding | 2.84954567129719 | bayes_pls_golite062009 |
transcription factor activity | 2.44389510173662 | bayes_pls_golite062009 |
RNA polymerase II transcription factor activity | 1.57041104288348 | bayes_pls_golite062009 |
mRNA binding | 1.28525296322454 | bayes_pls_golite062009 |
transcription activator activity | 1.20323819132961 | bayes_pls_golite062009 |
protein binding | 0.975412203442928 | bayes_pls_golite062009 |
sequence-specific DNA binding | 0.732558534458316 | bayes_pls_golite062009 |
transcription repressor activity | 0.686318575498149 | bayes_pls_golite062009 |
chromatin binding | 0.626365497850853 | bayes_pls_golite062009 |
transcription factor binding | 0.515821187939278 | bayes_pls_golite062009 |
catalytic activity | 0.263007611601737 | bayes_pls_golite062009 |
specific RNA polymerase II transcription factor activity | 0.200483461579207 | bayes_pls_golite062009 |
transcription cofactor activity | 0.113925660147477 | bayes_pls_golite062009 |
structure-specific DNA binding | 0.0855506955761403 | bayes_pls_golite062009 |
Region A: Residues: [122-266] |
1 11 21 31 41 51 | | | | | | 1 IIEAKQSLKN NGTIPVCKIA TVKNPKNGSV GLAIQVNYSS EVKENSVDSD DKAKVPPLIR 60 61 IVSGLELSDT KQKGKKFLVI AYEPFENIAI ELPPNEILFS ENNDMDNNND GVDELNKKCT 120 121 FWDAISKLYY VQFFFKQAEQ EQADV |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [225-266] |
1 11 21 31 41 51 | | | | | | 1 DMDNNNDGVD ELNKKCTFWD AISKLYYVQF FFKQAEQEQA DV |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.