| Protein: | gi|190407391 |
| Organism: | Saccharomyces cerevisiae RM11-1a |
| Length: | 459 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190407391.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..459] | [1..459] |
|
|
0.0 | [7..458] | [2..407] |
|
|
0.0 | [7..455] | [2..395] |
|
|
0.0 | [6..458] | [2..385] |
|
|
2.0E-91 | [4..457] | [3..359] |
|
|
2.0E-71 | [138..454] | [299..594] |
|
|
1.0E-34 | [3..136] | [155..290] |
|
|
6.0E-34 | [12..134] | [3..118] |
|
Region A: Residues: [1-177] |
1 11 21 31 41 51
| | | | | |
1 MTENQTAHVR ALILDATPLI TQSYTHYQNY AQSFYTTPTV FQEIKDAQAR KNLEIWQSLG 60
61 TLKLVHPSEN SIAKVSTFAK LTGDYSVLSA NDLHILALTY ELEIKLNNGD WRLRKKPGDA 120
121 LDASKADVGT DGKQKLTEDN KKEEDSESVP KKKNKRRGGK KQKAKREARE AREAENA
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| nuclease activity | 2.0989149357263 | bayes_pls_golite062009 |
| DNA binding | 1.98330542087379 | bayes_pls_golite062009 |
| binding | 1.91435224223408 | bayes_pls_golite062009 |
| nucleic acid binding | 1.86243238793767 | bayes_pls_golite062009 |
| exonuclease activity | 1.7620419369992 | bayes_pls_golite062009 |
| endodeoxyribonuclease activity | 1.74349203224875 | bayes_pls_golite062009 |
| deoxyribonuclease activity | 1.68760157046614 | bayes_pls_golite062009 |
| endonuclease activity | 1.2840172881923 | bayes_pls_golite062009 |
| catalytic activity | 1.27951740231695 | bayes_pls_golite062009 |
| flap endonuclease activity | 1.17726395799783 | bayes_pls_golite062009 |
| endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 1.07360773846975 | bayes_pls_golite062009 |
| 5'-3' exonuclease activity | 0.974028111038185 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.867731336605067 | bayes_pls_golite062009 |
| hydrolase activity | 0.827276601361763 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 0.79417076649627 | bayes_pls_golite062009 |
| protein binding | 0.695466920831325 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity, producing 5'-phosphomonoesters | 0.267787854683683 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity | 0.260397221344929 | bayes_pls_golite062009 |
|
Region A: Residues: [178-459] |
1 11 21 31 41 51
| | | | | |
1 NLELESKAEE HVEEAGSKEQ ICNDENIKES SDLNEVFEDA DDDGDWITPE NLTEAIIKDS 60
61 GEDTTGSLGV EASEEDRHVA LNRPENQVAL ATGDFAVQNV ALQMNLNLMN FMSGLKIKRI 120
121 RNYMLRCHAC FKIFPLPKDG KPKHFCASCG GQGTLLRCAV SVDSRTGNVT PHLKSNFQWN 180
181 NRGNRYSVAS PLSKNSQKRY GKKGHVHSKP QENVILREDQ KEYEKVIKQE EWTRRHNEKI 240
241 LNNWIGGGSA DNYISPFAIT GLKQHNVRIG KGRYVNSSKR RS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [223-386] |
1 11 21 31 41 51
| | | | | |
1 WITPENLTEA IIKDSGEDTT GSLGVEASEE DRHVALNRPE NQVALATGDF AVQNVALQMN 60
61 LNLMNFMSGL KIKRIRNYML RCHACFKIFP LPKDGKPKHF CASCGGQGTL LRCAVSVDSR 120
121 TGNVTPHLKS NFQWNNRGNR YSVASPLSKN SQKRYGKKGH VHSK
|
| Detection Method: | |
| Confidence: | 23.0 |
| Match: | 2conA |
| Description: | Solution Structure of RSGI RUH-035, a Zn-ribbon module in Mouse cDNA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA binding | 2.67504868533195 | bayes_pls_golite062009 |
| binding | 2.1226043957694 | bayes_pls_golite062009 |
| nucleic acid binding | 1.26170105245043 | bayes_pls_golite062009 |
| protein binding | 0.874974846355882 | bayes_pls_golite062009 |
| catalytic activity | 0.316629025709297 | bayes_pls_golite062009 |
|
Region A: Residues: [387-459] |
1 11 21 31 41 51
| | | | | |
1 PQENVILRED QKEYEKVIKQ EEWTRRHNEK ILNNWIGGGS ADNYISPFAI TGLKQHNVRI 60
61 GKGRYVNSSK RRS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
