| Protein: | gi|167469646 |
| Organism: | Yersinia pestis FV-1 |
| Length: | 610 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|167469646.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..610] | [1..610] |
|
|
0.0 | [14..610] | [1..597] |
|
|
0.0 | [1..610] | [1..610] |
|
|
0.0 | [1..610] | [1..610] |
|
|
0.0 | [1..610] | [1..608] |
|
|
0.0 | [14..603] | [7..599] |
|
|
0.0 | [1..607] | [1..606] |
|
|
0.0 | [14..608] | [17..610] |
|
|
0.0 | [1..608] | [15..624] |
|
|
0.0 | [1..610] | [1..608] |
|
Region A: Residues: [1-519] |
1 11 21 31 41 51
| | | | | |
1 MSTAAVINRE LLAVQVLRDT FGYQQFRPGQ QEIINATLSG QDCLVVMPTG GGKSLCYQIP 60
61 ALVTDGLTLV VSPLISLMKD QVDQLLAYGV GAGCLNSSQT REQQLAVMDG CRSGQIKLLY 120
121 IAPERLVMES FLDQLYQWRP ALLAVDEAHC ISQWGHDFRP EYRALGQLKQ RFPDLPVIAL 180
181 TATADEATRG DIVRLLNLDQ PLIQISSFDR PNIRYTLVEK FKPLDQLWRF VQDQRGKSGI 240
241 IYCNSRAKVE DTTARLQSRG LSVAAYHAGL DNERRAQVQE AFQRDDLQVV VATVAFGMGI 300
301 NKPNVRFVVH FDIPRTIESY YQETGRAGRD GLPAEAVLLY DPADMAWLRR CLEEKPAGAQ 360
361 QDIERHKLNA MGAFAEAQTC RRLVLLNYFG EGKQQPCGNC DICLDPPKRY DGLADAQKAL 420
421 SCVYRVGQRF GLGYIVEVLR GANNQRIREM GHDKLSVYGI GREQTHEHWV SVLRQLIHLG 480
481 LLSQNIAQFS ALQLTEAARP VLRAELPLQL AVPRIQSLK
|
| Detection Method: |  |
| Confidence: | 110.0 |
| Match: | 1oywA |
| Description: | Structure of the RecQ Catalytic Core |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA helicase activity | 5.33108843895592 | bayes_pls_golite062009 |
| four-way junction helicase activity | 5.20361383647271 | bayes_pls_golite062009 |
| binding | 2.64537357529343 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.16381244011837 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.13284212711072 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.11265775498161 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.11046854230259 | bayes_pls_golite062009 |
| single-stranded DNA-dependent ATPase activity | 1.8195489846634 | bayes_pls_golite062009 |
| helicase activity | 1.70242731830224 | bayes_pls_golite062009 |
| single-stranded DNA-dependent ATP-dependent DNA helicase activity | 1.69315154404254 | bayes_pls_golite062009 |
| hydrolase activity | 1.66122526893602 | bayes_pls_golite062009 |
| ATPase activity | 1.53315090215319 | bayes_pls_golite062009 |
| RNA helicase activity | 1.42791449104435 | bayes_pls_golite062009 |
| nucleic acid binding | 1.41477043612798 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 1.39335733374328 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 1.36724390116598 | bayes_pls_golite062009 |
| microtubule motor activity | 1.30090199952739 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.2539059700735 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 1.2155186842031 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| double-stranded DNA binding | 1.117585097627 | bayes_pls_golite062009 |
| DNA binding | 1.11699929651302 | bayes_pls_golite062009 |
| motor activity | 1.03253378953548 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| transcription regulator activity | 0.989226939888218 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 0.5886142102548 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.568457189190858 | bayes_pls_golite062009 |
| 0.442119153778711 | bayes_pls_golite062009 | |
| mismatched DNA binding | 0.31144582840038 | bayes_pls_golite062009 |
| exodeoxyribonuclease V activity | 0.185603938981231 | bayes_pls_golite062009 |
| protein binding | 0.170837278876362 | bayes_pls_golite062009 |
| nucleotide binding | 0.114848452385726 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.10713474095071 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.0916519414118148 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.0915913646217636 | bayes_pls_golite062009 |
| transcription factor activity | 0.0434163635422169 | bayes_pls_golite062009 |
| RNA binding | 0.0261282189186349 | bayes_pls_golite062009 |
|
Region A: Residues: [520-610] |
1 11 21 31 41 51
| | | | | |
1 VRSSANQKSY GGNYDRKLFA KLRKLRKSIA DEGNIPPYVV FNDATLLEMA EQMPITASEL 60
61 LSVNGVGQRK LERFGAPFMA LIRDHVDNND D
|
| Detection Method: | |
| Confidence: | 26.0 |
| Match: | 1wudA |
| Description: | E. coli RecQ HRDC domain |
Matching Structure (courtesy of the PDB): |
|
