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View Structure Prediction Details

Protein: gi|33357878, gi|...
Organism: Homo sapiens
Length: 263 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|33357878, gi|....

Description E-value Query
Range
Subject
Range
DCK_MOUSE - Deoxycytidine kinase OS=Mus musculus GN=Dck PE=1 SV=1
241.0 [0..4] [263..1]
DCK_BOVIN - Deoxycytidine kinase OS=Bos taurus GN=DCK PE=2 SV=1
241.0 [0..4] [263..1]
DCK - deoxycytidine kinase
238.0 [0..4] [263..1]
gi|54696740, gi|... - gi|61367811|gb|AAX43050.1| deoxycytidine kinase [synthetic construct], gi|61367804|gb|AAX43049.1| de...
238.0 [0..4] [263..1]
gi|67970435 - gi|67970435|dbj|BAE01560.1| unnamed protein product [Macaca fascicularis]
238.0 [0..4] [263..1]
gi|114594358 - gi|114594358|ref|XP_517245.2| PREDICTED: deoxycytidine kinase [Pan troglodytes]
234.0 [0..4] [263..1]

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Predicted Domain #1
Region A:
Residues: [1-263]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSHMATPPKR SCPSFSASSE GTRIKKISIE GNIAAGKSTF VNILKQLCED WEVVPEPVAR  60
   61 WCNVQSTQDE FEELTMSQKN GGNVLQMMYE KPERWSFTFQ TYACLSRIRA QLASLNGKLK 120
  121 DAEKPVLFFE RSVYSDRYIF ASNLYESECM NETEWTIYQD WHDWMNNQFG QSLELDGIIY 180
  181 LQATPETCLH RIYLRGRNEE QGIPLEYLEK LHYKHESWLL HRTLKTNFDY LQEVPILTLD 240
  241 VNEDFKDKYE SLVEKVKEFL STL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.0
Match: 1p5zB
Description: Deoxycytidine kinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrogen ion transporting ATP synthase activity, rotational mechanism 3.72637451756504 bayes_pls_golite062009
nucleobase, nucleoside, nucleotide kinase activity 3.66392587433723 bayes_pls_golite062009
substrate-specific transporter activity 3.05197579791755 bayes_pls_golite062009
phosphotransferase activity, phosphate group as acceptor 3.0424527711731 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 3.0180611270204 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 2.88777247981228 bayes_pls_golite062009
ion transmembrane transporter activity 2.79732178499987 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 2.77241594552543 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 2.68937468902218 bayes_pls_golite062009
cation transmembrane transporter activity 2.6034099674264 bayes_pls_golite062009
nucleotide kinase activity 2.24094813695083 bayes_pls_golite062009
binding 2.0681607836408 bayes_pls_golite062009
pyrophosphatase activity 1.92954258828893 bayes_pls_golite062009
purine ribonucleotide binding 1.85943679361938 bayes_pls_golite062009
ribonucleotide binding 1.85937484083653 bayes_pls_golite062009
purine nucleotide binding 1.8521191028835 bayes_pls_golite062009
nucleotide binding 1.84603132945448 bayes_pls_golite062009
kinase activity 1.80889641165674 bayes_pls_golite062009
adenylate kinase activity 1.66206135528976 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.60386625568858 bayes_pls_golite062009
ATP binding 1.5859264197035 bayes_pls_golite062009
adenyl ribonucleotide binding 1.55520429131224 bayes_pls_golite062009
adenyl nucleotide binding 1.53158018507951 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.14475274823167 bayes_pls_golite062009
DNA-dependent ATPase activity 1.09000822067541 bayes_pls_golite062009
helicase activity 1.0321619822241 bayes_pls_golite062009
protein-DNA loading ATPase activity 1.00391607739958 bayes_pls_golite062009
catalytic activity 1.00104173493322 bayes_pls_golite062009
nucleic acid binding 0.913322399315129 bayes_pls_golite062009
DNA clamp loader activity 0.91290128595235 bayes_pls_golite062009
transferase activity 0.871779313294914 bayes_pls_golite062009
protein kinase activity 0.841952172595456 bayes_pls_golite062009
proton-transporting ATPase activity, rotational mechanism 0.7959427724325 bayes_pls_golite062009
guanylate kinase activity 0.71257393037667 bayes_pls_golite062009
ATP-dependent helicase activity 0.5607032154839 bayes_pls_golite062009
purine NTP-dependent helicase activity 0.5607032154839 bayes_pls_golite062009
CTP synthase activity 0.554689818807922 bayes_pls_golite062009
DNA helicase activity 0.533349084356156 bayes_pls_golite062009
motor activity 0.50661339105747 bayes_pls_golite062009
cation-transporting ATPase activity 0.490497578956205 bayes_pls_golite062009
protein binding 0.378225828131122 bayes_pls_golite062009
DNA binding 0.376487324624615 bayes_pls_golite062009
protein serine/threonine kinase activity 0.345873656782869 bayes_pls_golite062009
transcription regulator activity 0.150159515184919 bayes_pls_golite062009
ATP-dependent DNA helicase activity 0.133736530545575 bayes_pls_golite062009
structure-specific DNA binding 0.0700789521444061 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of ions 0.0290859525230198 bayes_pls_golite062009
DNA polymerase activity 4.95561462330096E-4 bayes_pls_golite062009

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