| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.836216927684] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| chromosome, telomeric region | 1.7735E-5 | 2 | 27 | 2 | 6292 |
| transcription export complex | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| chromosomal part | 1.413E-3 | 2 | 237 | 2 | 6292 |
| chromosome | 1.8898E-3 | 2 | 274 | 2 | 6292 |
| nuclear chromosome, telomeric region | 7.2981E-3 | 2 | 23 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| RNA localization | 2.1151E-4 | 2 | 92 | 2 | 6292 |
| intracellular mRNA localization | 3.1764E-3 | 2 | 10 | 1 | 6292 |
| macromolecule localization | 3.9717E-3 | 2 | 397 | 2 | 6292 |
| telomere maintenance via telomere lengthening | 4.1283E-3 | 2 | 13 | 1 | 6292 |
| telomere maintenance via telomerase | 4.1283E-3 | 2 | 13 | 1 | 6292 |
| RNA-dependent DNA replication | 4.1283E-3 | 2 | 13 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| RNA binding | 3.3934E-3 | 2 | 367 | 2 | 6292 |
| ATP-dependent RNA helicase activity | 8.8811E-3 | 2 | 28 | 1 | 6292 |
| RNA-dependent ATPase activity | 9.1975E-3 | 2 | 29 | 1 | 6292 |