| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.874840592086] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| Cdc73/Paf1 complex | 2.5415E-3 | 2 | 8 | 1 | 6292 |
| CCR4-NOT core complex | 2.5415E-3 | 2 | 8 | 1 | 6292 |
| CCR4-NOT complex | 4.4455E-3 | 2 | 14 | 1 | 6292 |
| transcription elongation factor complex | 7.2981E-3 | 2 | 23 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| regulation of mitotic cell cycle | 1.2556E-4 | 2 | 71 | 2 | 6292 |
| regulation of cell cycle | 4.3024E-4 | 2 | 131 | 2 | 6292 |
| mitotic cell cycle | 1.6363E-3 | 2 | 255 | 2 | 6292 |
| traversing start control point of mitotic cell cycle | 1.9064E-3 | 2 | 6 | 1 | 6292 |
| nuclear-transcribed mRNA poly(A) tail shortening | 2.5415E-3 | 2 | 8 | 1 | 6292 |
| cell cycle phase | 3.5621E-3 | 2 | 376 | 2 | 6292 |
| cell cycle process | 6.0534E-3 | 2 | 490 | 2 | 6292 |
| cell cycle | 6.95E-3 | 2 | 525 | 2 | 6292 |
| regulation of exit from mitosis | 7.9314E-3 | 2 | 25 | 1 | 6292 |
| exit from mitosis | 7.9314E-3 | 2 | 25 | 1 | 6292 |
| G1 phase of mitotic cell cycle | 8.5646E-3 | 2 | 27 | 1 | 6292 |
| nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | 8.5646E-3 | 2 | 27 | 1 | 6292 |
| G1 phase | 8.5646E-3 | 2 | 27 | 1 | 6292 |
| mRNA 3'-end processing | 9.8303E-3 | 2 | 31 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| 3'-5'-exoribonuclease activity | 7.2981E-3 | 2 | 23 | 1 | 6292 |
| exoribonuclease activity | 8.248E-3 | 2 | 26 | 1 | 6292 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 8.248E-3 | 2 | 26 | 1 | 6292 |