| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.933950818091] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| ALD4 |
|
|
|
| NDE1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| nucleoid | 8.248E-3 | 2 | 26 | 1 | 6292 |
| mitochondrial nucleoid | 8.248E-3 | 2 | 26 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| ethanol metabolic process | 2.779E-6 | 2 | 11 | 2 | 6292 |
| monohydric alcohol metabolic process | 2.779E-6 | 2 | 11 | 2 | 6292 |
| alcohol metabolic process | 1.2172E-3 | 2 | 220 | 2 | 6292 |
| glucose catabolic process to ethanol | 2.224E-3 | 2 | 7 | 1 | 6292 |
| glycolytic fermentation | 2.5415E-3 | 2 | 8 | 1 | 6292 |
| NADH oxidation | 3.811E-3 | 2 | 12 | 1 | 6292 |
| chronological cell aging | 4.4455E-3 | 2 | 14 | 1 | 6292 |
| NADH metabolic process | 4.7627E-3 | 2 | 15 | 1 | 6292 |
| fermentation | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| NAD metabolic process | 7.9314E-3 | 2 | 25 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| aldehyde dehydrogenase (NAD) activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| NADH dehydrogenase activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| oxidoreductase activity | 1.9877E-3 | 2 | 281 | 2 | 6292 |
| oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 6.0308E-3 | 2 | 19 | 1 | 6292 |
| oxidoreductase activity, acting on NADH or NADPH | 6.6645E-3 | 2 | 21 | 1 | 6292 |
| oxidoreductase activity, acting on the aldehyde or oxo group of donors | 7.9314E-3 | 2 | 25 | 1 | 6292 |