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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 1.79536442966]
Complex Size: 2 proteins

Complex Member Proteins

Protein

 GO Cellular Component GO Biological Process GO Molecular Function
LSP1
  • cytoplasm
  • mitochondrion
  • mitochondrial outer membrane
  • eisosome
    		•
  • response to heat
  • endocytosis
    		•
  • protein kinase inhibitor activity
    		•
    PIL1
  • cytoplasm
  • mitochondrion
  • mitochondrial outer membrane
  • eisosome
    		•
  • response to heat
  • protein localization
  • endocytosis
    		•
  • protein kinase inhibitor activity
    		•

    Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    eisosome 5.0527E-8 2 2 2 6292
    mitochondrial outer membrane 2.1151E-4 2 92 2 6292
    cell cortex part 2.304E-4 2 96 2 6292
    cell cortex 2.974E-4 2 109 2 6292
    outer membrane 7.9595E-4 2 178 2 6292
    organelle outer membrane 7.9595E-4 2 178 2 6292
    mitochondrial membrane 1.7808E-3 2 266 2 6292
    mitochondrial envelope 2.4514E-3 2 312 2 6292
    mitochondrial part 5.6881E-3 2 475 2 6292
    envelope 6.43E-3 2 505 2 6292
    organelle envelope 6.43E-3 2 505 2 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    response to heat 1.3945E-5 2 24 2 6292
    response to temperature stimulus 2.3495E-5 2 31 2 6292
    endocytosis 1.9342E-4 2 88 2 6292
    membrane invagination 2.2085E-4 2 94 2 6292
    response to abiotic stimulus 3.4287E-4 2 117 2 6292
    membrane organization 9.8542E-4 2 198 2 6292
    cellular membrane organization 9.8542E-4 2 198 2 6292
    vesicle-mediated transport 2.9119E-3 2 340 2 6292
    response to stress 6.2277E-3 2 497 2 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    kinase inhibitor activity 2.779E-6 2 11 2 6292
    protein kinase inhibitor activity 2.779E-6 2 11 2 6292
    enzyme inhibitor activity 1.7735E-5 2 27 2 6292
    protein kinase regulator activity 5.2295E-5 2 46 2 6292
    kinase regulator activity 5.9419E-5 2 49 2 6292
    enzyme regulator activity 1.0773E-3 2 207 2 6292
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle