YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.846992309705]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribonucleoprotein complex assembly 2.1151E-4 2 92 2 6292
cellular macromolecular complex assembly 8.3223E-4 2 182 2 6292
generation of catalytic spliceosome for second transesterification step 1.5888E-3 2 5 1 6292
cellular macromolecular complex subunit organization 1.6882E-3 2 259 2 6292
macromolecular complex assembly 1.9877E-3 2 281 2 6292
spliceosomal conformational changes to generate catalytic conformation 2.859E-3 2 9 1 6292
macromolecular complex subunit organization 3.2108E-3 2 357 2 6292
ribonucleoprotein complex biogenesis 3.5243E-3 2 374 2 6292
RNA processing 3.6384E-3 2 380 2 6292
cellular component assembly 3.7349E-3 2 385 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ATP-dependent RNA helicase activity 1.9099E-5 2 28 2 6292
RNA-dependent ATPase activity 2.0514E-5 2 29 2 6292
RNA helicase activity 4.3504E-5 2 42 2 6292
ATP-dependent helicase activity 5.6994E-5 2 48 2 6292
purine NTP-dependent helicase activity 5.6994E-5 2 48 2 6292
helicase activity 1.7194E-4 2 83 2 6292
ATPase activity, coupled 5.5711E-4 2 149 2 6292
ATPase activity 1.1194E-3 2 211 2 6292
second spliceosomal transesterification activity 2.224E-3 2 7 1 6292
nucleoside-triphosphatase activity 2.7262E-3 2 329 2 6292
hydrolase activity, acting on acid anhydrides 3.1391E-3 2 353 2 6292
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 3.1391E-3 2 353 2 6292
pyrophosphatase activity 3.1391E-3 2 353 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle