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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.87814149082]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

CCR4-NOT core complex 2.5415E-3 2 8 1 6292
CCR4-NOT complex 4.4455E-3 2 14 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nuclear-transcribed mRNA poly(A) tail shortening 2.5415E-3 2 8 1 6292
post-translational protein modification 3.2108E-3 2 357 2 6292
protein modification process 6.278E-3 2 499 2 6292
macromolecule modification 8.1649E-3 2 569 2 6292
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 8.5646E-3 2 27 1 6292
mRNA 3'-end processing 9.8303E-3 2 31 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

3'-5'-exoribonuclease activity 7.2981E-3 2 23 1 6292
exoribonuclease activity, producing 5'-phosphomonoesters 8.248E-3 2 26 1 6292
exoribonuclease activity 8.248E-3 2 26 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle