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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.889313717396]
Complex Size: 2 proteins

Complex Member Proteins

Protein

 GO Cellular Component GO Biological Process GO Molecular Function
COR1
  • mitochondrion
  • mitochondrial respiratory chain complex III
    		•
  • aerobic respiration
    		•
  • ubiquinol-cytochrome-c reductase activity
    		•
    CYT1
  • mitochondrial respiratory chain
  • mitochondrion
  • mitochondrial respiratory chain complex III
  • mitochondrial inner membrane
    		•
  • oxidative phosphorylation
  • mitochondrial electron transport, ubiquinol to cytochrome c
    		•
  • electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity
    		•

    Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    mitochondrial respiratory chain complex III 2.2737E-6 2 10 2 6292
    respiratory chain complex III 2.2737E-6 2 10 2 6292
    mitochondrial respiratory chain 1.6421E-5 2 26 2 6292
    respiratory chain 1.6421E-5 2 26 2 6292
    mitochondrial membrane part 2.5011E-4 2 100 2 6292
    mitochondrial inner membrane 7.6048E-4 2 174 2 6292
    organelle inner membrane 8.5997E-4 2 185 2 6292
    mitochondrial membrane 1.7808E-3 2 266 2 6292
    mitochondrial envelope 2.4514E-3 2 312 2 6292
    mitochondrial part 5.6881E-3 2 475 2 6292
    envelope 6.43E-3 2 505 2 6292
    organelle envelope 6.43E-3 2 505 2 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    cellular respiration 2.3525E-4 2 97 2 6292
    energy derivation by oxidation of organic compounds 5.5711E-4 2 149 2 6292
    generation of precursor metabolites and energy 9.5571E-4 2 195 2 6292
    mitochondrial electron transport, ubiquinol to cytochrome c 2.859E-3 2 9 1 6292
    respiratory electron transport chain 7.9314E-3 2 25 1 6292
    electron transport chain 7.9314E-3 2 25 1 6292
    ATP synthesis coupled electron transport 7.9314E-3 2 25 1 6292
    mitochondrial ATP synthesis coupled electron transport 7.9314E-3 2 25 1 6292
    oxidation reduction 8.248E-3 2 26 1 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity 3.1786E-4 2 1 1 6292
    electron carrier activity 2.5415E-3 2 8 1 6292
    oxidoreductase activity, acting on diphenols and related substances as donors 2.859E-3 2 9 1 6292
    ubiquinol-cytochrome-c reductase activity 2.859E-3 2 9 1 6292
    oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor 2.859E-3 2 9 1 6292
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